AT4G28780

Description : GDSL-like Lipase/Acylhydrolase superfamily protein

Gene families : OG0000013 (Archaeplastida) Phylogenetic Tree(s): OG0000013_tree ,
OG_05_0000852 (LandPlants) Phylogenetic Tree(s): OG_05_0000852_tree ,
OG_06_0000860 (SeedPlants) Phylogenetic Tree(s): OG_06_0000860_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G28780
Cluster	HCCA: Cluster_216

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00262870	evm_27.TU.AmTr_v1...	GDSL esterase/lipase At1g74460 OS=Arabidopsis thaliana	0.03	Archaeplastida
AMTR_s00021p00182700	evm_27.TU.AmTr_v1...	GDSL esterase/lipase At5g45950 OS=Arabidopsis thaliana	0.08	Archaeplastida
AMTR_s00023p00071810	evm_27.TU.AmTr_v1...	GDSL esterase/lipase At2g40250 OS=Arabidopsis thaliana	0.02	Archaeplastida
AMTR_s00039p00143210	No alias	Cell wall.cutin and suberin.cutin polyester...	0.02	Archaeplastida
AMTR_s00060p00187780	evm_27.TU.AmTr_v1...	GDSL esterase/lipase At5g37690 OS=Arabidopsis thaliana	0.03	Archaeplastida
AMTR_s00074p00170090	evm_27.TU.AmTr_v1...	GDSL esterase/lipase At4g26790 OS=Arabidopsis thaliana	0.04	Archaeplastida
AMTR_s00099p00119900	evm_27.TU.AmTr_v1...	GDSL esterase/lipase At1g71250 OS=Arabidopsis thaliana	0.02	Archaeplastida
AT1G74460	No alias	GDSL-like Lipase/Acylhydrolase superfamily protein	0.02	Archaeplastida
AT5G37690	No alias	SGNH hydrolase-type esterase superfamily protein	0.02	Archaeplastida
GSVIVT01005081001	No alias	GDSL esterase/lipase At2g23540 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01007995001	No alias	GDSL esterase/lipase At1g74460 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01018115001	No alias	GDSL esterase/lipase 7 OS=Arabidopsis thaliana	0.02	Archaeplastida
GSVIVT01021147001	No alias	GDSL esterase/lipase At5g45960 OS=Arabidopsis thaliana	0.04	Archaeplastida
GSVIVT01021149001	No alias	GDSL esterase/lipase At5g45950 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01025913001	No alias	GDSL esterase/lipase At1g33811 OS=Arabidopsis thaliana	0.05	Archaeplastida
GSVIVT01030799001	No alias	GDSL esterase/lipase At5g37690 OS=Arabidopsis thaliana	0.04	Archaeplastida
GSVIVT01036524001	No alias	GDSL esterase/lipase 7 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01036525001	No alias	GDSL esterase/lipase At1g29670 OS=Arabidopsis thaliana	0.02	Archaeplastida
Gb_01601	No alias	GDSL esterase/lipase At5g22810 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Gb_06060	No alias	GDSL esterase/lipase At2g04570 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Gb_07440	No alias	GDSL esterase/lipase At2g42990 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Gb_24152	No alias	GDSL esterase/lipase At2g04570 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Gb_24158	No alias	GDSL esterase/lipase At2g42990 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Gb_29553	No alias	cutin synthase (CD)	0.03	Archaeplastida
LOC_Os01g52770.1	No alias	GDSL esterase/lipase At5g45670 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os01g61570.1	No alias	GDSL esterase/lipase At2g40250 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os02g40440.1	No alias	cutin synthase (CD)	0.03	Archaeplastida
LOC_Os02g50000.1	No alias	GDSL esterase/lipase At5g37690 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os02g57110.1	No alias	cutin synthase (CD)	0.04	Archaeplastida
LOC_Os03g64170.1	No alias	GDSL esterase/lipase At1g20120 OS=Arabidopsis thaliana...	0.05	Archaeplastida
LOC_Os04g42860.1	No alias	cutin synthase (CD)	0.04	Archaeplastida
LOC_Os06g05550.1	No alias	GDSL esterase/lipase APG OS=Arabidopsis thaliana...	0.02	Archaeplastida
LOC_Os06g05630.1	No alias	GDSL esterase/lipase APG OS=Arabidopsis thaliana...	0.02	Archaeplastida
LOC_Os06g14630.1	No alias	GDSL esterase/lipase At5g37690 OS=Arabidopsis thaliana...	0.04	Archaeplastida
LOC_Os07g47210.1	No alias	GDSL esterase/lipase At2g23540 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os09g36880.1	No alias	GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os10g30290.1	No alias	GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os12g17570.1	No alias	GDSL esterase/lipase At1g33811 OS=Arabidopsis thaliana...	0.05	Archaeplastida
MA_10282830g0010	No alias	GDSL esterase/lipase At2g23540 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_103942g0010	No alias	GDSL esterase/lipase At2g42990 OS=Arabidopsis thaliana...	0.04	Archaeplastida
MA_10435924g0010	No alias	GDSL esterase/lipase At2g04570 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_127685g0010	No alias	GDSL esterase/lipase At2g42990 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_65830g0010	No alias	cutin synthase (CD)	0.02	Archaeplastida
Mp8g13940.1	No alias	cutin synthase (CD)	0.03	Archaeplastida
Pp3c17_21660V3.1	No alias	GDSL-like Lipase/Acylhydrolase superfamily protein	0.02	Archaeplastida
Pp3c1_33670V3.1	No alias	GDSL-like Lipase/Acylhydrolase superfamily protein	0.01	Archaeplastida
Pp3c9_4680V3.1	No alias	GDSL-like Lipase/Acylhydrolase family protein	0.02	Archaeplastida
Smo128933	No alias	Cell wall.cutin and suberin.cutin polyester...	0.03	Archaeplastida
Smo174517	No alias	Cell wall.cutin and suberin.cutin polyester...	0.03	Archaeplastida
Smo232013	No alias	GDSL esterase/lipase At2g23540 OS=Arabidopsis thaliana	0.02	Archaeplastida
Smo402598	No alias	GDSL esterase/lipase At1g71250 OS=Arabidopsis thaliana	0.03	Archaeplastida
Smo403122	No alias	Cell wall.cutin and suberin.cutin polyester...	0.03	Archaeplastida
Smo438768	No alias	GDSL esterase/lipase At5g03810 OS=Arabidopsis thaliana	0.02	Archaeplastida
Smo77657	No alias	GDSL esterase/lipase At1g71250 OS=Arabidopsis thaliana	0.02	Archaeplastida
Solyc02g071610.3.1	No alias	GDSL esterase/lipase At5g45670 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Solyc02g071690.2.1	No alias	GDSL esterase/lipase At1g29670 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Solyc03g005900.4.1	No alias	GDSL esterase/lipase At5g45670 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Solyc03g005910.3.1	No alias	GDSL esterase/lipase At1g29670 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Solyc04g050730.3.1	No alias	cutin synthase (CD)	0.06	Archaeplastida
Zm00001e002585_P001	No alias	GDSL esterase/lipase At2g42990 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Zm00001e005274_P001	No alias	GDSL esterase/lipase At3g53100 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Zm00001e013042_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e013310_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e013382_P001	No alias	GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Zm00001e016222_P001	No alias	cutin synthase (CD)	0.05	Archaeplastida
Zm00001e017207_P001	No alias	GDSL esterase/lipase At1g33811 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Zm00001e023608_P001	No alias	cutin synthase (CD)	0.03	Archaeplastida
Zm00001e028131_P001	No alias	GDSL esterase/lipase APG OS=Arabidopsis thaliana...	0.03	Archaeplastida
Zm00001e030010_P001	No alias	GDSL esterase/lipase APG OS=Arabidopsis thaliana...	0.04	Archaeplastida
Zm00001e031698_P002	No alias	GDSL esterase/lipase At1g71691 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Zm00001e032157_P002	No alias	GDSL esterase/lipase At1g29660 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Zm00001e032804_P003	No alias	GDSL esterase/lipase EXL1 OS=Arabidopsis thaliana...	0.07	Archaeplastida
Zm00001e035980_P001	No alias	GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009451	RNA modification	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010103	stomatal complex morphogenesis	RCA	Interproscan
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
BP	GO:0016556	mRNA modification	RCA	Interproscan
BP	GO:0032502	developmental process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090626	plant epidermis morphogenesis	None	Extended
BP	GO:0090698	post-embryonic plant morphogenesis	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003905	alkylbase DNA N-glycosylase activity	IEP	Neighborhood
MF	GO:0004650	polygalacturonase activity	IEP	Neighborhood
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	IEP	Neighborhood
BP	GO:0009409	response to cold	IEP	Neighborhood
BP	GO:0009637	response to blue light	IEP	Neighborhood
BP	GO:0009914	hormone transport	IEP	Neighborhood
BP	GO:0009926	auxin polar transport	IEP	Neighborhood
BP	GO:0010048	vernalization response	IEP	Neighborhood
BP	GO:0010155	regulation of proton transport	IEP	Neighborhood
BP	GO:0010315	auxin efflux	IEP	Neighborhood
BP	GO:0010540	basipetal auxin transport	IEP	Neighborhood
BP	GO:0010541	acropetal auxin transport	IEP	Neighborhood
BP	GO:0010928	regulation of auxin mediated signaling pathway	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Neighborhood
BP	GO:0017014	protein nitrosylation	IEP	Neighborhood
BP	GO:0018119	peptidyl-cysteine S-nitrosylation	IEP	Neighborhood
BP	GO:0018198	peptidyl-cysteine modification	IEP	Neighborhood
MF	GO:0019104	DNA N-glycosylase activity	IEP	Neighborhood
CC	GO:0031012	extracellular matrix	IEP	Neighborhood
BP	GO:0034762	regulation of transmembrane transport	IEP	Neighborhood
BP	GO:0034765	regulation of ion transmembrane transport	IEP	Neighborhood
BP	GO:0043473	pigmentation	IEP	Neighborhood
BP	GO:0043476	pigment accumulation	IEP	Neighborhood
BP	GO:0043478	pigment accumulation in response to UV light	IEP	Neighborhood
BP	GO:0043479	pigment accumulation in tissues in response to UV light	IEP	Neighborhood
BP	GO:0043480	pigment accumulation in tissues	IEP	Neighborhood
BP	GO:0043481	anthocyanin accumulation in tissues in response to UV light	IEP	Neighborhood
MF	GO:0043733	DNA-3-methylbase glycosylase activity	IEP	Neighborhood
CC	GO:0044421	extracellular region part	IEP	Neighborhood
CC	GO:0048046	apoplast	IEP	Neighborhood
BP	GO:0048440	carpel development	IEP	Neighborhood
BP	GO:0060918	auxin transport	IEP	Neighborhood
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Neighborhood
BP	GO:1904062	regulation of cation transmembrane transport	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001087	GDSL	33	343

External Links

No external refs found!

AT4G28780

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation