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  5. Pp3c23_10270V3.1

Pp3c23_10270V3.1


Description : binding


Gene families : OG0000410 (Archaeplastida) Phylogenetic Tree(s): OG0000410_tree ,
OG_05_0002118 (LandPlants) Phylogenetic Tree(s): OG_05_0002118_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c23_10270V3.1
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00192140 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.sister chromatid... 0.04 Archaeplastida
AMTR_s00061p00213120 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.sister chromatid... 0.03 Archaeplastida
AMTR_s00065p00174980 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.sister chromatid... 0.11 Archaeplastida
AT1G15940 No alias Tudor/PWWP/MBT superfamily protein 0.04 Archaeplastida
AT1G77600 No alias ARM repeat superfamily protein 0.05 Archaeplastida
AT4G31880 No alias LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant... 0.07 Archaeplastida
AT5G47690 No alias binding 0.04 Archaeplastida
GSVIVT01002731001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.1 Archaeplastida
GSVIVT01002824001 No alias No description available 0.13 Archaeplastida
GSVIVT01008876001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.07 Archaeplastida
GSVIVT01023587001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.03 Archaeplastida
GSVIVT01035890001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.06 Archaeplastida
Gb_02487 No alias cohesin cofactor (PDS5) 0.04 Archaeplastida
Gb_09525 No alias cohesin cofactor (PDS5) 0.07 Archaeplastida
Gb_12481 No alias cohesin cofactor (PDS5) 0.02 Archaeplastida
Gb_23673 No alias cohesin cofactor (PDS5) 0.06 Archaeplastida
LOC_Os02g39920.1 No alias cohesin cofactor (PDS5) 0.04 Archaeplastida
LOC_Os06g17840.1 No alias cohesin cofactor (PDS5) 0.09 Archaeplastida
MA_10093130g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10426926g0010 No alias cohesin cofactor (PDS5) 0.08 Archaeplastida
MA_10433886g0010 No alias cohesin cofactor (PDS5) 0.05 Archaeplastida
MA_10434055g0010 No alias cohesin cofactor (PDS5) 0.04 Archaeplastida
MA_10434304g0010 No alias cohesin cofactor (PDS5) 0.03 Archaeplastida
MA_180523g0010 No alias cohesin cofactor (PDS5) 0.03 Archaeplastida
MA_214607g0010 No alias cohesin cofactor (PDS5) 0.07 Archaeplastida
MA_25261g0010 No alias no hits & (original description: none) 0.08 Archaeplastida
MA_523g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_815998g0010 No alias cohesin cofactor (PDS5) 0.02 Archaeplastida
Mp3g13850.1 No alias cohesin cofactor (PDS5) 0.02 Archaeplastida
Solyc03g117010.4.1 No alias cohesin cofactor (PDS5) 0.04 Archaeplastida
Solyc06g065710.3.1 No alias cohesin cofactor (PDS5) 0.04 Archaeplastida
Solyc11g012770.2.1 No alias cohesin cofactor (PDS5) 0.09 Archaeplastida
Zm00001e007658_P001 No alias cohesin cofactor (PDS5) 0.02 Archaeplastida
Zm00001e015094_P002 No alias cohesin cofactor (PDS5) 0.08 Archaeplastida
Zm00001e019139_P001 No alias cohesin cofactor (PDS5) 0.07 Archaeplastida
Zm00001e022962_P003 No alias cohesin cofactor (PDS5) 0.04 Archaeplastida
Zm00001e030989_P001 No alias cohesin cofactor (PDS5) 0.13 Archaeplastida
Zm00001e036853_P003 No alias cohesin cofactor (PDS5) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!