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  5. Pp3c23_15050V3.1

Pp3c23_15050V3.1


Description : RHOMBOID-like 1


Gene families : OG0000617 (Archaeplastida) Phylogenetic Tree(s): OG0000617_tree ,
OG_05_0000454 (LandPlants) Phylogenetic Tree(s): OG_05_0000454_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c23_15050V3.1
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00097470 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.02 Archaeplastida
AMTR_s00104p00044730 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.03 Archaeplastida
GSVIVT01017301001 No alias Protein degradation.peptidase families.serine-type... 0.03 Archaeplastida
LOC_Os04g48130.1 No alias protease (RBL) 0.03 Archaeplastida
LOC_Os10g37760.1 No alias protease (RBL) 0.03 Archaeplastida
Mp6g05540.1 No alias protease (RBL) 0.03 Archaeplastida
Pp3c17_14100V3.1 No alias RHOMBOID-like 1 0.03 Archaeplastida
Smo84059 No alias Protein degradation.peptidase families.serine-type... 0.04 Archaeplastida
Solyc06g005580.4.1 No alias protease (RBL) 0.03 Archaeplastida
Solyc08g080500.3.1 No alias protease (RBL) 0.02 Archaeplastida
Zm00001e002140_P002 No alias protease (RBL) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
MF GO:0004743 pyruvate kinase activity IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006096 glycolytic process IEP Neighborhood
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Neighborhood
BP GO:0006541 glutamine metabolic process IEP Neighborhood
BP GO:0006542 glutamine biosynthetic process IEP Neighborhood
BP GO:0006757 ATP generation from ADP IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
BP GO:0009132 nucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016211 ammonia ligase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0030955 potassium ion binding IEP Neighborhood
MF GO:0031420 alkali metal ion binding IEP Neighborhood
BP GO:0042866 pyruvate biosynthetic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046031 ADP metabolic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0046939 nucleotide phosphorylation IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
MF GO:0070403 NAD+ binding IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!