Pp3c23_15260V3.1

Description : SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein

Gene families : OG0003158 (Archaeplastida) Phylogenetic Tree(s): OG0003158_tree ,
OG_05_0003043 (LandPlants) Phylogenetic Tree(s): OG_05_0003043_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c23_15260V3.1
Cluster	HCCA: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00021501.12	No alias	RNA processing.RNA splicing.U2-type-intron-specific...	0.02	Archaeplastida
Cre06.g307450	No alias	RNA processing.RNA splicing.U2-type-intron-specific...	0.02	Archaeplastida
Gb_03741	No alias	component SF3A1 of splicing factor 3A complex	0.02	Archaeplastida
Gb_32888	No alias	component SF3A1 of splicing factor 3A complex	0.03	Archaeplastida
Solyc02g081960.3.1	No alias	component SF3A1 of splicing factor 3A complex	0.02	Archaeplastida
Solyc04g005690.4.1	No alias	component SF3A1 of splicing factor 3A complex	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Neighborhood
CC	GO:0005737	cytoplasm	IEP	Neighborhood
BP	GO:0006399	tRNA metabolic process	IEP	Neighborhood
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Neighborhood
MF	GO:0016874	ligase activity	IEP	Neighborhood
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Neighborhood
BP	GO:0034660	ncRNA metabolic process	IEP	Neighborhood
BP	GO:0043038	amino acid activation	IEP	Neighborhood
BP	GO:0043039	tRNA aminoacylation	IEP	Neighborhood
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!