1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c23_20710V3.1

Pp3c23_20710V3.1


Description : Nucleolar GTP-binding protein


Gene families : OG0003912 (Archaeplastida) Phylogenetic Tree(s): OG0003912_tree ,
OG_05_0003948 (LandPlants) Phylogenetic Tree(s): OG_05_0003948_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c23_20710V3.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00241220 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
Cpa|evm.model.tig00021432.35 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
LOC_Os06g09570.1 No alias NOG1 LSU processome regulatory GTPase 0.04 Archaeplastida
Mp6g16060.1 No alias NOG1 LSU processome regulatory GTPase 0.04 Archaeplastida
Solyc01g081010.4.1 No alias NOG1 LSU processome regulatory GTPase 0.02 Archaeplastida
Solyc07g053730.4.1 No alias NOG1 LSU processome regulatory GTPase 0.03 Archaeplastida
Zm00001e030762_P002 No alias NOG1 LSU processome regulatory GTPase 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0031369 translation initiation factor binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
InterPro domains Description Start Stop
IPR010674 NOG1_Rossman_fold_dom 235 292
IPR012973 NOG_C 412 465
No external refs found!