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  5. Pp3c23_22040V3.1

Pp3c23_22040V3.1


Description : DNAse I-like superfamily protein


Gene families : OG0003309 (Archaeplastida) Phylogenetic Tree(s): OG0003309_tree ,
OG_05_0004039 (LandPlants) Phylogenetic Tree(s): OG_05_0004039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c23_22040V3.1
Cluster HCCA: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
AT3G58580 No alias DNAse I-like superfamily protein 0.02 Archaeplastida
Cpa|evm.model.tig00000342.20 No alias RNA processing.RNA decay.deadenylation-dependent... 0.02 Archaeplastida
Cre11.g475900 No alias RNA processing.RNA decay.deadenylation-dependent... 0.04 Archaeplastida
GSVIVT01033442001 No alias RNA processing.RNA decay.deadenylation-dependent... 0.02 Archaeplastida
Gb_27365 No alias deadenylase component CCR4 of CCR4-NOT complex 0.02 Archaeplastida
LOC_Os03g07080.1 No alias deadenylase component CCR4 of CCR4-NOT complex 0.01 Archaeplastida
LOC_Os10g27230.3 No alias deadenylase component CCR4 of CCR4-NOT complex 0.03 Archaeplastida
Mp1g17770.1 No alias deadenylase component CCR4 of CCR4-NOT complex 0.02 Archaeplastida
Smo270348 No alias RNA processing.RNA decay.deadenylation-dependent... 0.02 Archaeplastida
Solyc10g078950.2.1 No alias deadenylase component CCR4 of CCR4-NOT complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!