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  5. Pp3c23_7840V3.1

Pp3c23_7840V3.1


Description : RAB GTPase homolog A4D


Gene families : OG0000173 (Archaeplastida) Phylogenetic Tree(s): OG0000173_tree ,
OG_05_0000161 (LandPlants) Phylogenetic Tree(s): OG_05_0000161_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c23_7840V3.1
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AT1G01200 RABA3, ATRAB-A3, ATRABA3 RAB GTPase homolog A3 0.02 Archaeplastida
AT1G73640 RABA6a, AtRABA6a RAB GTPase homolog A6A 0.02 Archaeplastida
AT4G18430 AtRABA1e, RABA1e RAB GTPase homolog A1E 0.03 Archaeplastida
Gb_03447 No alias A-class RAB GTPase 0.01 Archaeplastida
LOC_Os01g54590.1 No alias A-class RAB GTPase 0.01 Archaeplastida
LOC_Os05g20050.1 No alias A-class RAB GTPase 0.01 Archaeplastida
Solyc03g006270.3.1 No alias A-class RAB GTPase 0.02 Archaeplastida
Solyc05g052900.3.1 No alias A-class RAB GTPase 0.01 Archaeplastida
Zm00001e031368_P002 No alias A-class RAB GTPase 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!