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  5. Pp3c24_10460V3.1

Pp3c24_10460V3.1


Description : Ergosterol biosynthesis ERG4/ERG24 family


Gene families : OG0002082 (Archaeplastida) Phylogenetic Tree(s): OG0002082_tree ,
OG_05_0007254 (LandPlants) Phylogenetic Tree(s): OG_05_0007254_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c24_10460V3.1
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AT3G52940 ELL1, HYD2, FK Ergosterol biosynthesis ERG4/ERG24 family 0.05 Archaeplastida
Cpa|evm.model.tig00000711.21 No alias Lipid metabolism.phytosterols.campesterol... 0.02 Archaeplastida
LOC_Os02g26650.3 No alias sterol delta7 reductase 0.03 Archaeplastida
Smo185064 No alias Lipid metabolism.phytosterols.campesterol... 0.03 Archaeplastida
Solyc06g074090.3.1 No alias sterol delta7 reductase 0.03 Archaeplastida
Solyc09g009040.3.1 No alias sterol delta14 reductase 0.03 Archaeplastida
Zm00001e014537_P001 No alias sterol delta7 reductase 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0016126 sterol biosynthetic process IEA Interproscan
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0010498 proteasomal protein catabolic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030126 COPI vesicle coat IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001171 Ergosterol_biosynth_ERG4_ERG24 76 448
No external refs found!