1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c24_15470V3.1

Pp3c24_15470V3.1


Description : IBR domain-containing protein


Gene families : OG0000511 (Archaeplastida) Phylogenetic Tree(s): OG0000511_tree ,
OG_05_0001468 (LandPlants) Phylogenetic Tree(s): OG_05_0001468_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c24_15470V3.1
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
AT1G05890 ARI5, ATARI5 RING/U-box superfamily protein 0.04 Archaeplastida
Cre16.g682350 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
GSVIVT01003757001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01010742001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01031904001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
MA_87115g0010 No alias Probable E3 ubiquitin-protein ligase ARI2 OS=Arabidopsis... 0.02 Archaeplastida
MA_96036g0010 No alias Probable E3 ubiquitin-protein ligase ARI7 OS=Arabidopsis... 0.04 Archaeplastida
Pp3c26_11830V3.1 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Smo180454 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Solyc06g073340.3.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Archaeplastida
Solyc11g008580.3.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.04 Archaeplastida
Solyc12g089000.2.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Archaeplastida
Zm00001e000911_P002 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 Archaeplastida
Zm00001e038664_P001 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!