Pp3c24_18820V3.1

Description : acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases

Gene families : OG0007095 (Archaeplastida) Phylogenetic Tree(s): OG0007095_tree ,
OG_05_0007962 (LandPlants) Phylogenetic Tree(s): OG_05_0007962_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c24_18820V3.1
Cluster	HCCA: Cluster_20

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00236210	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle machineries.RNA polymerase...	0.13	Archaeplastida
AT1G63680	MURE, PDE316, ATMURE	acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases	0.13	Archaeplastida
Cre12.g519900	No alias	RNA biosynthesis.organelle machineries.RNA polymerase...	0.04	Archaeplastida
GSVIVT01019746001	No alias	RNA biosynthesis.organelle machineries.RNA polymerase...	0.08	Archaeplastida
Gb_05462	No alias	PAP11/MURE cofactor of plastid-encoded RNA polymerase	0.08	Archaeplastida
Mp6g20740.1	No alias	PAP11/MURE cofactor of plastid-encoded RNA polymerase	0.16	Archaeplastida
Solyc08g081170.4.1	No alias	PAP11/MURE cofactor of plastid-encoded RNA polymerase	0.08	Archaeplastida
Zm00001e037912_P001	No alias	PAP11/MURE cofactor of plastid-encoded RNA polymerase	0.08	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	IEA	Interproscan
MF	GO:0016874	ligase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004386	helicase activity	IEP	Neighborhood
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Neighborhood
BP	GO:0006399	tRNA metabolic process	IEP	Neighborhood
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Neighborhood
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Neighborhood
MF	GO:0031072	heat shock protein binding	IEP	Neighborhood
BP	GO:0043038	amino acid activation	IEP	Neighborhood
BP	GO:0043039	tRNA aminoacylation	IEP	Neighborhood
MF	GO:0051082	unfolded protein binding	IEP	Neighborhood
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004101	Mur_ligase_C	627	710
IPR013221	Mur_ligase_cen	401	606
IPR000713	Mur_ligase_N	314	389

External Links

No external refs found!