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  5. Pp3c24_19540V3.1

Pp3c24_19540V3.1


Description : tubby like protein 3


Gene families : OG0000335 (Archaeplastida) Phylogenetic Tree(s): OG0000335_tree ,
OG_05_0000295 (LandPlants) Phylogenetic Tree(s): OG_05_0000295_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c24_19540V3.1
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00040910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TUB... 0.02 Archaeplastida
AT1G25280 TLP10, AtTLP10 tubby like protein 10 0.02 Archaeplastida
AT1G76900 AtTLP1, TLP1 tubby like protein 1 0.04 Archaeplastida
AT3G06380 TLP9, ATTLP9 tubby-like protein 9 0.02 Archaeplastida
AT5G18680 AtTLP11, TLP11 tubby like protein 11 0.04 Archaeplastida
GSVIVT01017810001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.02 Archaeplastida
GSVIVT01029701001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.02 Archaeplastida
GSVIVT01034528001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.02 Archaeplastida
LOC_Os02g47640.1 No alias transcription factor (TUB) 0.01 Archaeplastida
LOC_Os08g01290.5 No alias transcription factor (TUB) 0.01 Archaeplastida
MA_132704g0010 No alias transcription factor (TUB) 0.03 Archaeplastida
Solyc01g067680.3.1 No alias transcription factor (TUB) 0.02 Archaeplastida
Solyc07g062390.4.1 No alias transcription factor (TUB) 0.04 Archaeplastida
Solyc10g046970.2.1 No alias transcription factor (TUB) 0.01 Archaeplastida
Zm00001e019166_P001 No alias transcription factor (TUB) 0.01 Archaeplastida
Zm00001e028052_P001 No alias transcription factor (TUB) 0.05 Archaeplastida
Zm00001e031774_P001 No alias transcription factor (TUB) 0.05 Archaeplastida
Zm00001e032131_P001 No alias transcription factor (TUB) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!