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  5. Pp3c24_2030V3.1

Pp3c24_2030V3.1


Description : calmodulin 5


Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree ,
OG_05_0091319 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c24_2030V3.1
Cluster HCCA: Cluster_287

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00127800 evm_27.TU.AmTr_v1... Calmodulin OS=Solanum lycopersicum 0.03 Archaeplastida
AT1G12310 No alias Calcium-binding EF-hand family protein 0.03 Archaeplastida
AT2G41090 No alias Calcium-binding EF-hand family protein 0.02 Archaeplastida
AT5G37780 TCH1, CAM1, ACAM-1 calmodulin 1 0.02 Archaeplastida
Cpa|evm.model.tig00001388.4 No alias Caltractin OS=Scherffelia dubia 0.01 Archaeplastida
Cpa|evm.model.tig00021720.13 No alias RNA processing.messenger ribonucleoprotein particle... 0.02 Archaeplastida
Cre03.g150300 No alias Calmodulin-3 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Cre11.g468450 No alias RNA processing.messenger ribonucleoprotein particle... 0.01 Archaeplastida
GSVIVT01003796001 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_37768 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os01g17190.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.02 Archaeplastida
LOC_Os02g39380.1 No alias Probable calcium-binding protein CML17 OS=Oryza sativa... 0.02 Archaeplastida
LOC_Os03g59770.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os07g12240.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g04890.1 No alias Probable calcium-binding protein CML32 OS=Oryza sativa... 0.02 Archaeplastida
LOC_Os12g12730.1 No alias Probable calcium-binding protein CML28 OS=Oryza sativa... 0.02 Archaeplastida
MA_10429336g0010 No alias Calmodulin-related protein OS=Petunia hybrida... 0.02 Archaeplastida
MA_18615g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp1g00920.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.02 Archaeplastida
Solyc03g005240.2.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.02 Archaeplastida
Solyc06g068960.1.1 No alias Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.02 Archaeplastida
Solyc12g099990.2.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.02 Archaeplastida
Zm00001e007722_P001 No alias Probable calcium-binding protein CML22 OS=Oryza sativa... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Neighborhood
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004813 alanine-tRNA ligase activity IEP Neighborhood
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006419 alanyl-tRNA aminoacylation IEP Neighborhood
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Neighborhood
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 13 73
IPR002048 EF_hand_dom 83 146
No external refs found!