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  5. Pp3c24_20700V3.1

Pp3c24_20700V3.1


Description : Family of unknown function (DUF566)


Gene families : OG0000642 (Archaeplastida) Phylogenetic Tree(s): OG0000642_tree ,
OG_05_0000381 (LandPlants) Phylogenetic Tree(s): OG_05_0000381_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c24_20700V3.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00037320 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.microtubule Tubulin... 0.02 Archaeplastida
Gb_06254 No alias component AUG8 of Augmin gamma-TuRC recruiting complex.... 0.02 Archaeplastida
Gb_12272 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_12273 No alias AUGMIN subunit 8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os09g25500.1 No alias component AUG8 of Augmin gamma-TuRC recruiting complex 0.03 Archaeplastida
MA_100179g0010 No alias QWRF motif-containing protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008483 transaminase activity IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030126 COPI vesicle coat IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!