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  5. Pp3c24_20740V3.1

Pp3c24_20740V3.1


Description : DNAse I-like superfamily protein


Gene families : OG0003309 (Archaeplastida) Phylogenetic Tree(s): OG0003309_tree ,
OG_05_0004039 (LandPlants) Phylogenetic Tree(s): OG_05_0004039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c24_20740V3.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000342.20 No alias RNA processing.RNA decay.deadenylation-dependent... 0.02 Archaeplastida
GSVIVT01033442001 No alias RNA processing.RNA decay.deadenylation-dependent... 0.05 Archaeplastida
LOC_Os03g07080.1 No alias deadenylase component CCR4 of CCR4-NOT complex 0.02 Archaeplastida
LOC_Os10g27230.3 No alias deadenylase component CCR4 of CCR4-NOT complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!