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AT4G30410


Description : sequence-specific DNA binding transcription factors


Gene families : OG0005074 (Archaeplastida) Phylogenetic Tree(s): OG0005074_tree ,
OG_05_0003475 (LandPlants) Phylogenetic Tree(s): OG_05_0003475_tree ,
OG_06_0001029 (SeedPlants) Phylogenetic Tree(s): OG_06_0001029_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G30410
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01023743001 No alias No description available 0.04 Archaeplastida
LOC_Os02g08220.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os06g44320.1 No alias transcription factor (bHLH) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004560 alpha-L-fucosidase activity IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
BP GO:0009411 response to UV IEP Neighborhood
CC GO:0009505 plant-type cell wall IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
BP GO:0009825 multidimensional cell growth IEP Neighborhood
BP GO:0009832 plant-type cell wall biogenesis IEP Neighborhood
BP GO:0009932 cell tip growth IEP Neighborhood
CC GO:0015629 actin cytoskeleton IEP Neighborhood
MF GO:0015928 fucosidase activity IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0016125 sterol metabolic process IEP Neighborhood
BP GO:0016126 sterol biosynthetic process IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
MF GO:0030570 pectate lyase activity IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0043473 pigmentation IEP Neighborhood
BP GO:0043476 pigment accumulation IEP Neighborhood
BP GO:0043478 pigment accumulation in response to UV light IEP Neighborhood
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP Neighborhood
BP GO:0043480 pigment accumulation in tissues IEP Neighborhood
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0047513 1,2-alpha-L-fucosidase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0048767 root hair elongation IEP Neighborhood
MF GO:0051015 actin filament binding IEP Neighborhood
BP GO:0051017 actin filament bundle assembly IEP Neighborhood
BP GO:0061572 actin filament bundle organization IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
MF GO:0080043 quercetin 3-O-glucosyltransferase activity IEP Neighborhood
BP GO:2000280 regulation of root development IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!