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  5. Pp3c24_6770V3.1

Pp3c24_6770V3.1


Description : chloroplast thylakoid lumen protein


Gene families : OG0006774 (Archaeplastida) Phylogenetic Tree(s): OG0006774_tree ,
OG_05_0006039 (LandPlants) Phylogenetic Tree(s): OG_05_0006039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c24_6770V3.1
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00252900 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.03 Archaeplastida
AT4G02530 No alias chloroplast thylakoid lumen protein 0.03 Archaeplastida
GSVIVT01015564001 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 Archaeplastida
Gb_39226 No alias photosynthetic acclimation MPH2 acclimation factor 0.04 Archaeplastida
LOC_Os06g49160.1 No alias photosynthetic acclimation MPH2 acclimation factor 0.03 Archaeplastida
MA_4765g0010 No alias photosynthetic acclimation MPH2 acclimation factor 0.02 Archaeplastida
Mp7g01620.1 No alias photosynthetic acclimation MPH2 acclimation factor 0.06 Archaeplastida
Pp3c8_15020V3.1 No alias chloroplast thylakoid lumen protein 0.02 Archaeplastida
Smo412250 No alias Photosynthesis.photophosphorylation.photosystem... 0.06 Archaeplastida
Solyc12g009600.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e013209_P001 No alias photosynthetic acclimation MPH2 acclimation factor 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
CC GO:0009512 cytochrome b6f complex IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!