Pp3c24_7070V3.1


Description : TFIIB zinc-binding protein


Gene families : OG0007434 (Archaeplastida) Phylogenetic Tree(s): OG0007434_tree ,
OG_05_0008908 (LandPlants) Phylogenetic Tree(s): OG_05_0008908_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c24_7070V3.1
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AT3G25940 No alias TFIIB zinc-binding protein 0.03 Archaeplastida
Cpa|evm.model.tig00021464.48 No alias No description available 0.03 Archaeplastida
Cre01.g018000 No alias No description available 0.02 Archaeplastida
GSVIVT01009945001 No alias No description available 0.02 Archaeplastida
LOC_Os03g50380.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc04g054510.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!