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  5. Pp3c25_1090V3.1

Pp3c25_1090V3.1


Description : RING/U-box superfamily protein


Gene families : OG0004488 (Archaeplastida) Phylogenetic Tree(s): OG0004488_tree ,
OG_05_0004113 (LandPlants) Phylogenetic Tree(s): OG_05_0004113_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c25_1090V3.1
Cluster HCCA: Cluster_273

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00219090 evm_27.TU.AmTr_v1... Protein degradation.peptide... 0.03 Archaeplastida
AT1G08910 EMB3001 zinc ion binding;zinc ion binding 0.02 Archaeplastida
GSVIVT01026971001 No alias Protein degradation.peptide... 0.02 Archaeplastida
LOC_Os06g06870.1 No alias SUMO chain-forming-ligase E4 enzyme (PIAL) 0.02 Archaeplastida
MA_10431638g0010 No alias E4 SUMO-protein ligase PIAL1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc08g008130.4.1 No alias SUMO chain-forming-ligase E4 enzyme (PIAL) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
CC GO:0030119 AP-type membrane coat adaptor complex IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044599 AP-5 adaptor complex IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!