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  5. Pp3c25_13080V3.1

Pp3c25_13080V3.1


Description : las1-like family protein


Gene families : OG0005081 (Archaeplastida) Phylogenetic Tree(s): OG0005081_tree ,
OG_05_0005123 (LandPlants) Phylogenetic Tree(s): OG_05_0005123_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c25_13080V3.1
Cluster HCCA: Cluster_274

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00095p00033450 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
Cpa|evm.model.tig00000949.28 No alias Potassium channel AKT1 OS=Oryza sativa subsp. indica 0.02 Archaeplastida
Cre01.g002201 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 Archaeplastida
Gb_08337 No alias LAS1 pre-rRNA cleavage factor involved in ITS2 rRNA removal 0.03 Archaeplastida
Gb_28940 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10436352g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c5_25710V3.1 No alias las1-like family protein 0.02 Archaeplastida
Solyc07g045370.3.1 No alias LAS1 pre-rRNA cleavage factor involved in ITS2 rRNA removal 0.03 Archaeplastida
Zm00001e019521_P001 No alias LAS1 pre-rRNA cleavage factor involved in ITS2 rRNA removal 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!