Pp3c25_13340V3.1


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG0001027 (Archaeplastida) Phylogenetic Tree(s): OG0001027_tree ,
OG_05_0000803 (LandPlants) Phylogenetic Tree(s): OG_05_0000803_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c25_13340V3.1
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01025009001 No alias RNA processing.messenger ribonucleoprotein particle... 0.03 Archaeplastida
Gb_04102 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.03 Archaeplastida
Mp2g07590.1 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.03 Archaeplastida
Solyc10g086400.2.1 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.03 Archaeplastida
Zm00001e033165_P001 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Neighborhood
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!