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  5. Pp3c25_14470V3.1

Pp3c25_14470V3.1


Description : RING/U-box superfamily protein


Gene families : OG0001766 (Archaeplastida) Phylogenetic Tree(s): OG0001766_tree ,
OG_05_0001442 (LandPlants) Phylogenetic Tree(s): OG_05_0001442_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c25_14470V3.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00149p00070960 evm_27.TU.AmTr_v1... MND1-interacting protein 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G32530 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT4G03000 No alias RING/U-box superfamily protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!