1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c25_2880V3.1

Pp3c25_2880V3.1


Description : thioredoxin M-type 1


Gene families : OG0000516 (Archaeplastida) Phylogenetic Tree(s): OG0000516_tree ,
OG_05_0000996 (LandPlants) Phylogenetic Tree(s): OG_05_0000996_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c25_2880V3.1
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00016000 evm_27.TU.AmTr_v1... Redox homeostasis.chloroplast redox homeostasis.M-type... 0.09 Archaeplastida
AT1G03680 ATHM1, THM1, TRX-M1, ATM1 thioredoxin M-type 1 0.12 Archaeplastida
AT1G43560 Aty2, ty2 thioredoxin Y2 0.07 Archaeplastida
AT1G50320 THX, ATHX, ATX thioredoxin X 0.12 Archaeplastida
AT3G15360 ATHM4, TRX-M4, ATM4 thioredoxin M-type 4 0.13 Archaeplastida
AT4G03520 ATHM2 Thioredoxin superfamily protein 0.03 Archaeplastida
Cpa|evm.model.tig00020563.189 No alias No description available 0.02 Archaeplastida
Cre01.g052250 No alias Redox homeostasis.chloroplast redox homeostasis.X-type... 0.04 Archaeplastida
GSVIVT01010012001 No alias Redox homeostasis.chloroplast redox homeostasis.M-type... 0.14 Archaeplastida
GSVIVT01014360001 No alias Redox homeostasis.chloroplast redox homeostasis.M-type... 0.02 Archaeplastida
GSVIVT01026149001 No alias Redox homeostasis.chloroplast redox homeostasis.X-type... 0.04 Archaeplastida
GSVIVT01034548001 No alias Redox homeostasis.chloroplast redox homeostasis.Y-type... 0.02 Archaeplastida
Gb_00914 No alias M-type thioredoxin 0.06 Archaeplastida
Gb_31181 No alias M-type thioredoxin 0.07 Archaeplastida
Gb_37068 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g57930.1 No alias X-type thioredoxin 0.05 Archaeplastida
LOC_Os12g08730.1 No alias M-type thioredoxin 0.14 Archaeplastida
MA_10433314g0010 No alias X-type thioredoxin 0.05 Archaeplastida
MA_474303g0010 No alias M-type thioredoxin 0.09 Archaeplastida
Mp3g04790.1 No alias X-type thioredoxin 0.05 Archaeplastida
Mp4g18950.1 No alias M-type thioredoxin 0.19 Archaeplastida
Solyc01g008250.3.1 No alias X-type thioredoxin 0.14 Archaeplastida
Solyc07g063190.3.1 No alias M-type thioredoxin 0.05 Archaeplastida
Solyc10g006970.3.1 No alias M-type thioredoxin 0.09 Archaeplastida
Solyc12g013810.2.1 No alias M-type thioredoxin 0.17 Archaeplastida
Zm00001e006545_P001 No alias no hits & (original description: none) 0.09 Archaeplastida
Zm00001e018385_P001 No alias M-type thioredoxin 0.05 Archaeplastida
Zm00001e039586_P001 No alias M-type thioredoxin 0.12 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 88 186
No external refs found!