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  5. Pp3c25_4540V3.1

Pp3c25_4540V3.1


Description : nucleosome assembly protein 1;2


Gene families : OG0001309 (Archaeplastida) Phylogenetic Tree(s): OG0001309_tree ,
OG_05_0001356 (LandPlants) Phylogenetic Tree(s): OG_05_0001356_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c25_4540V3.1
Cluster HCCA: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00247340 evm_27.TU.AmTr_v1... Chromatin organisation.histone chaperone... 0.03 Archaeplastida
AT4G26110 ATNAP1;1, NAP1;1 nucleosome assembly protein1;1 0.03 Archaeplastida
LOC_Os05g46230.1 No alias histone chaperone (NAP) 0.03 Archaeplastida
LOC_Os06g05660.1 No alias histone chaperone (NAP) 0.04 Archaeplastida
Solyc03g121700.4.1 No alias histone chaperone (NAP) 0.02 Archaeplastida
Solyc12g008940.2.1 No alias histone chaperone (NAP) 0.03 Archaeplastida
Zm00001e030011_P002 No alias histone chaperone (NAP) 0.03 Archaeplastida
Zm00001e032269_P004 No alias histone chaperone (NAP) 0.03 Archaeplastida
Zm00001e036497_P001 No alias histone chaperone (NAP) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!