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  5. Pp3c25_7410V3.1

Pp3c25_7410V3.1


Description : high mobility group B1


Gene families : OG0000591 (Archaeplastida) Phylogenetic Tree(s): OG0000591_tree ,
OG_05_0000611 (LandPlants) Phylogenetic Tree(s): OG_05_0000611_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c25_7410V3.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00240750 evm_27.TU.AmTr_v1... High mobility group B protein 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01032839001 No alias No description available 0.02 Archaeplastida
GSVIVT01032840001 No alias High mobility group B protein 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_07912 No alias High mobility group B protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os06g51220.2 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_72555g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e013329_P001 No alias DNA-binding protein MNB1B OS=Zea mays... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!