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  5. Pp3c25_760V3.1

Pp3c25_760V3.1


Description : Pectin lyase-like superfamily protein


Gene families : OG0000078 (Archaeplastida) Phylogenetic Tree(s): OG0000078_tree ,
OG_05_0032177 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c25_760V3.1
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00123p00050980 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AT1G05310 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT2G19150 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT5G07430 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT5G47500 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
GSVIVT01013832001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.01 Archaeplastida
GSVIVT01014641001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01015290001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01015852001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01018823001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.01 Archaeplastida
GSVIVT01023786001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01034985001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
Gb_23209 No alias pectin methylesterase 0.02 Archaeplastida
Gb_27225 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os11g43830.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os11g45720.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os12g37660.1 No alias pectin methylesterase 0.03 Archaeplastida
MA_10267810g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_304854g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_40503g0010 No alias pectin methylesterase 0.01 Archaeplastida
MA_66089g0010 No alias pectin methylesterase 0.02 Archaeplastida
Mp3g01170.1 No alias pectin methylesterase 0.02 Archaeplastida
Pp3c10_20120V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c12_23790V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c16_19430V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c19_8330V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c1_6010V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c25_3840V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c3_30560V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c3_35240V3.1 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
Pp3c5_12820V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Smo73566 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
Solyc08g078640.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc09g091730.4.1 No alias pectin methylesterase 0.01 Archaeplastida
Solyc10g083820.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e002891_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e027944_P002 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e033546_P001 No alias pectin methylesterase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Neighborhood
BP GO:0006090 pyruvate metabolic process IEP Neighborhood
BP GO:0006096 glycolytic process IEP Neighborhood
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Neighborhood
BP GO:0006757 ATP generation from ADP IEP Neighborhood
BP GO:0009132 nucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009166 nucleotide catabolic process IEP Neighborhood
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016832 aldehyde-lyase activity IEP Neighborhood
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Neighborhood
BP GO:0019362 pyridine nucleotide metabolic process IEP Neighborhood
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
BP GO:0042866 pyruvate biosynthetic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
BP GO:0046031 ADP metabolic process IEP Neighborhood
BP GO:0046434 organophosphate catabolic process IEP Neighborhood
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
BP GO:0046939 nucleotide phosphorylation IEP Neighborhood
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Neighborhood
BP GO:1901292 nucleoside phosphate catabolic process IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!