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  5. Pp3c25_9550V3.1

Pp3c25_9550V3.1


Description : Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain


Gene families : OG0000311 (Archaeplastida) Phylogenetic Tree(s): OG0000311_tree ,
OG_05_0001728 (LandPlants) Phylogenetic Tree(s): OG_05_0001728_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c25_9550V3.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00050160 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.03 Archaeplastida
AMTR_s00140p00029580 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.02 Archaeplastida
AT1G05380 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.03 Archaeplastida
AT2G27980 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.07 Archaeplastida
AT2G36720 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.08 Archaeplastida
AT3G14980 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.03 Archaeplastida
AT4G14920 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.02 Archaeplastida
AT5G36740 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.03 Archaeplastida
Cpa|evm.model.tig00020563.182 No alias No description available 0.02 Archaeplastida
Cre01.g018200 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.03 Archaeplastida
Cre12.g516150 No alias No description available 0.02 Archaeplastida
Cre16.g694208 No alias No description available 0.07 Archaeplastida
GSVIVT01014219001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.02 Archaeplastida
GSVIVT01016041001 No alias Heat shock cognate protein 80 OS=Solanum lycopersicum 0.01 Archaeplastida
GSVIVT01017972001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.07 Archaeplastida
GSVIVT01031451001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.03 Archaeplastida
GSVIVT01031452001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.01 Archaeplastida
GSVIVT01033711001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.03 Archaeplastida
Gb_06644 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.03 Archaeplastida
Gb_10246 No alias PHD finger transcription factor 0.02 Archaeplastida
Gb_41487 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g35430.1 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.02 Archaeplastida
LOC_Os04g59510.1 No alias PHD finger transcription factor 0.03 Archaeplastida
LOC_Os06g01170.1 No alias PHD finger transcription factor 0.02 Archaeplastida
LOC_Os07g07690.1 No alias PHD finger transcription factor 0.04 Archaeplastida
MA_139275g0010 No alias PHD finger transcription factor 0.04 Archaeplastida
MA_14500g0010 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.06 Archaeplastida
MA_3931g0010 No alias PHD finger transcription factor 0.05 Archaeplastida
Mp2g04330.1 No alias PHD finger transcription factor 0.06 Archaeplastida
Solyc03g005170.3.1 No alias PHD finger transcription factor 0.02 Archaeplastida
Solyc07g062600.4.1 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.02 Archaeplastida
Solyc09g065340.3.1 No alias PHD finger transcription factor 0.05 Archaeplastida
Solyc09g076010.3.1 No alias PHD finger transcription factor 0.06 Archaeplastida
Solyc10g083800.2.1 No alias PHD finger transcription factor 0.03 Archaeplastida
Solyc10g084650.3.1 No alias PHD finger transcription factor 0.03 Archaeplastida
Solyc11g066480.2.1 No alias PHD finger transcription factor 0.04 Archaeplastida
Zm00001e005667_P001 No alias PHD finger transcription factor 0.06 Archaeplastida
Zm00001e012046_P003 No alias PHD finger transcription factor 0.04 Archaeplastida
Zm00001e013368_P001 No alias PHD finger transcription factor 0.05 Archaeplastida
Zm00001e031101_P001 No alias PHD finger transcription factor 0.02 Archaeplastida
Zm00001e032904_P002 No alias PHD finger transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
MF GO:0061608 nuclear import signal receptor activity IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
MF GO:0140142 nucleocytoplasmic carrier activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!