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  5. Pp3c26_11100V3.1

Pp3c26_11100V3.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG0008036 (Archaeplastida) Phylogenetic Tree(s): OG0008036_tree ,
OG_05_0007862 (LandPlants) Phylogenetic Tree(s): OG_05_0007862_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c26_11100V3.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00083700 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g59040... 0.04 Archaeplastida
AT3G59040 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.19 Archaeplastida
GSVIVT01020809001 No alias Pentatricopeptide repeat-containing protein At3g59040... 0.14 Archaeplastida
Gb_12237 No alias plastidial RNA processing factor (PPR287) 0.05 Archaeplastida
LOC_Os08g09270.1 No alias plastidial RNA processing factor (PPR287) 0.14 Archaeplastida
MA_10437236g0010 No alias plastidial RNA processing factor (PPR287) 0.05 Archaeplastida
Mp6g14500.1 No alias plastidial RNA processing factor (PPR287) 0.1 Archaeplastida
Smo448320 No alias Pentatricopeptide repeat-containing protein At3g59040... 0.07 Archaeplastida
Solyc07g043600.4.1 No alias plastidial RNA processing factor (PPR287) 0.11 Archaeplastida
Zm00001e039973_P002 No alias plastidial RNA processing factor (PPR287) 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!