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  5. Pp3c26_11300V3.1

Pp3c26_11300V3.1


Description : Intron maturase, type II family protein


Gene families : OG0004888 (Archaeplastida) Phylogenetic Tree(s): OG0004888_tree ,
OG_05_0003570 (LandPlants) Phylogenetic Tree(s): OG_05_0003570_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c26_11300V3.1
Cluster HCCA: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00213160 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 Archaeplastida
AMTR_s00110p00142760 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 Archaeplastida
AT5G46920 No alias Intron maturase, type II family protein 0.01 Archaeplastida
GSVIVT01023127001 No alias RNA processing.organelle machineries.RNA... 0.05 Archaeplastida
Solyc08g077385.1.1 No alias nMAT1/2 type-I mitochondrial RNA splicing factor 0.03 Archaeplastida
Zm00001e000458_P001 No alias nMAT1/2 type-I mitochondrial RNA splicing factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!