1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c26_11830V3.1

Pp3c26_11830V3.1


Description : RING/U-box superfamily protein


Gene families : OG0000511 (Archaeplastida) Phylogenetic Tree(s): OG0000511_tree ,
OG_05_0003960 (LandPlants) Phylogenetic Tree(s): OG_05_0003960_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c26_11830V3.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00073650 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT2G16090 ATARI2, ARI2 RING/U-box superfamily protein 0.03 Archaeplastida
GSVIVT01003757001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01010742001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01031904001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
MA_87115g0020 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.04 Archaeplastida
Mp2g00820.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 Archaeplastida
Mp2g15500.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 Archaeplastida
Pp3c24_15470V3.1 No alias IBR domain-containing protein 0.04 Archaeplastida
Pp3c4_29960V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Solyc12g089000.2.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.04 Archaeplastida
Zm00001e003726_P005 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Archaeplastida
Zm00001e024244_P001 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!