Pp3c26_12080V3.1


Description : Sas10/Utp3/C1D family


Gene families : OG0001925 (Archaeplastida) Phylogenetic Tree(s): OG0001925_tree ,
OG_05_0005808 (LandPlants) Phylogenetic Tree(s): OG_05_0005808_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c26_12080V3.1
Cluster HCCA: Cluster_290

Target Alias Description ECC score Gene Family Method Actions
AT1G07840 No alias Sas10/Utp3/C1D family 0.04 Archaeplastida
AT2G43650 EMB2777 Sas10/U3 ribonucleoprotein (Utp) family protein 0.03 Archaeplastida
Cre09.g394399 No alias No description available 0.04 Archaeplastida
GSVIVT01009200001 No alias No description available 0.04 Archaeplastida
GSVIVT01038137001 No alias No description available 0.03 Archaeplastida
Mp4g18120.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Smo405212 No alias No description available 0.03 Archaeplastida
Solyc04g076560.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g072320.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g072390.2.1 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
CC GO:0032040 small-subunit processome IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
InterPro domains Description Start Stop
IPR007146 Sas10/Utp3/C1D 12 92
No external refs found!