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  5. Pp3c26_12270V3.1

Pp3c26_12270V3.1


Description : Zinc finger C-x8-C-x5-C-x3-H type family protein


Gene families : OG0000421 (Archaeplastida) Phylogenetic Tree(s): OG0000421_tree ,
OG_05_0000820 (LandPlants) Phylogenetic Tree(s): OG_05_0000820_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c26_12270V3.1
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AT2G32930 ZFN2 zinc finger nuclease 2 0.02 Archaeplastida
GSVIVT01007563001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 Archaeplastida
GSVIVT01010980001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 Archaeplastida
GSVIVT01019119001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 Archaeplastida
Gb_02527 No alias C3H zinc finger transcription factor 0.02 Archaeplastida
Gb_03032 No alias C3H zinc finger transcription factor 0.03 Archaeplastida
MA_137427g0010 No alias C3H zinc finger transcription factor 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 81 105
IPR000571 Znf_CCCH 39 59
IPR000571 Znf_CCCH 286 307
IPR000571 Znf_CCCH 237 262
No external refs found!