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  5. Pp3c26_4000V3.1

Pp3c26_4000V3.1


Description : hydroxyproline-rich glycoprotein family protein


Gene families : OG0006759 (Archaeplastida) Phylogenetic Tree(s): OG0006759_tree ,
OG_05_0007276 (LandPlants) Phylogenetic Tree(s): OG_05_0007276_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c26_4000V3.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00175860 evm_27.TU.AmTr_v1... Protein translocation.chloroplast.inner envelope TIC... 0.05 Archaeplastida
AT5G16620 TIC40, ATTIC40, PDE120 hydroxyproline-rich glycoprotein family protein 0.08 Archaeplastida
Cre12.g508000 No alias Protein translocation.chloroplast.inner envelope TIC... 0.04 Archaeplastida
LOC_Os04g35900.1 No alias component Tic40 of inner envelope TIC translocation system 0.02 Archaeplastida
Mp3g00830.1 No alias component Tic40 of inner envelope TIC translocation system 0.07 Archaeplastida
Smo437721 No alias Protein translocation.chloroplast.inner envelope TIC... 0.03 Archaeplastida
Solyc11g020300.2.1 No alias component Tic40 of inner envelope TIC translocation system 0.02 Archaeplastida
Zm00001e008048_P001 No alias component Tic40 of inner envelope TIC translocation system 0.08 Archaeplastida
Zm00001e040911_P002 No alias component Tic40 of inner envelope TIC translocation system 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!