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  5. Pp3c26_7390V3.1

Pp3c26_7390V3.1


Description : RNA binding;GTP binding


Gene families : OG0006586 (Archaeplastida) Phylogenetic Tree(s): OG0006586_tree ,
OG_05_0008248 (LandPlants) Phylogenetic Tree(s): OG_05_0008248_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c26_7390V3.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00203340 evm_27.TU.AmTr_v1... GTPase ERA-like, chloroplastic OS=Arabidopsis thaliana 0.1 Archaeplastida
AT5G66470 No alias RNA binding;GTP binding 0.12 Archaeplastida
Cre02.g141706 No alias GTPase ERA1, chloroplastic OS=Zea mays 0.03 Archaeplastida
GSVIVT01018924001 No alias GTPase ERA-like, chloroplastic OS=Arabidopsis thaliana 0.08 Archaeplastida
Gb_05092 No alias GTPase ERA-like, chloroplastic OS=Arabidopsis thaliana... 0.08 Archaeplastida
LOC_Os05g49220.1 No alias GTPase ERA-like, chloroplastic OS=Oryza sativa subsp.... 0.16 Archaeplastida
MA_124092g0010 No alias GTPase ERA-like, chloroplastic OS=Oryza sativa subsp.... 0.04 Archaeplastida
Mp2g20310.1 No alias GTPase ERA-like, chloroplastic OS=Oryza sativa subsp.... 0.11 Archaeplastida
Smo75698 No alias GTPase ERA1, chloroplastic OS=Zea mays 0.06 Archaeplastida
Solyc02g077280.4.1 No alias GTPase ERA-like, chloroplastic OS=Arabidopsis thaliana... 0.09 Archaeplastida
Zm00001e026555_P001 No alias no hits & (original description: none) 0.14 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!