Pp3c27_1430V3.1

Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein

Gene families : OG0005194 (Archaeplastida) Phylogenetic Tree(s): OG0005194_tree ,
OG_05_0004260 (LandPlants) Phylogenetic Tree(s): OG_05_0004260_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c27_1430V3.1
Cluster	HCCA: Cluster_290

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00065p00048130	evm_27.TU.AmTr_v1...	DEAD-box ATP-dependent RNA helicase 16 OS=Arabidopsis thaliana	0.02	Archaeplastida
AT4G34910	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.07	Archaeplastida
Cre12.g526850	No alias	DEAD-box ATP-dependent RNA helicase 16 OS=Arabidopsis thaliana	0.06	Archaeplastida
Gb_38528	No alias	DEAD-box ATP-dependent RNA helicase 16 OS=Arabidopsis...	0.06	Archaeplastida
LOC_Os03g51900.1	No alias	DEAD-box ATP-dependent RNA helicase 16 OS=Oryza sativa...	0.05	Archaeplastida
MA_10430669g0020	No alias	DEAD-box ATP-dependent RNA helicase 16 OS=Arabidopsis...	0.03	Archaeplastida
MA_71366g0010	No alias	DEAD-box ATP-dependent RNA helicase 16 OS=Arabidopsis...	0.04	Archaeplastida
Mp7g04610.1	No alias	DEAD-box ATP-dependent RNA helicase 16 OS=Oryza sativa...	0.08	Archaeplastida
Smo440996	No alias	DEAD-box ATP-dependent RNA helicase 16 OS=Arabidopsis thaliana	0.02	Archaeplastida
Solyc02g070100.3.1	No alias	DEAD-box ATP-dependent RNA helicase 16 OS=Arabidopsis...	0.04	Archaeplastida
Zm00001e012111_P001	No alias	DEAD-box ATP-dependent RNA helicase 16 OS=Oryza sativa...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	73	248
IPR001650	Helicase_C	289	439

External Links

No external refs found!