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Description : Ribosomal protein S4
Gene families : OG0001616 (Archaeplastida) Phylogenetic Tree(s): OG0001616_tree ,
OG_05_0001469 (LandPlants) Phylogenetic Tree(s): OG_05_0001469_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pp3c27_1920V3.1 | |
| Cluster | HCCA: Cluster_121 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G15200 | No alias | Ribosomal protein S4 | 0.03 | Archaeplastida | |
| AT5G39850 | No alias | Ribosomal protein S4 | 0.02 | Archaeplastida | |
| Cpa|evm.model.tig00000826.24 | No alias | 40S ribosomal protein S9-1 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| Cre08.g359750 | No alias | 40S ribosomal protein S9-1 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| GSVIVT01008028001 | No alias | 40S ribosomal protein S9-2 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
| GSVIVT01011384001 | No alias | 40S ribosomal protein S9-2 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| LOC_Os03g05980.1 | No alias | component RPS9 of SSU proteome | 0.03 | Archaeplastida | |
| LOC_Os11g38959.1 | No alias | component RPS9 of SSU proteome | 0.03 | Archaeplastida | |
| MA_10429805g0030 | No alias | component RPS9 of SSU proteome | 0.03 | Archaeplastida | |
| Mp3g00520.1 | No alias | component RPS9 of SSU proteome | 0.03 | Archaeplastida | |
| Mp6g10930.1 | No alias | component RPS9 of SSU proteome | 0.03 | Archaeplastida | |
| Pp3c13_19780V3.1 | No alias | Ribosomal protein S4 | 0.03 | Archaeplastida | |
| Smo74302 | No alias | 40S ribosomal protein S9-1 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| Solyc01g010540.3.1 | No alias | component RPS9 of SSU proteome | 0.02 | Archaeplastida | |
| Solyc04g005680.4.1 | No alias | component RPS9 of SSU proteome | 0.04 | Archaeplastida | |
| Solyc05g007250.3.1 | No alias | component RPS9 of SSU proteome | 0.02 | Archaeplastida | |
| Zm00001e010819_P002 | No alias | component RPS9 of SSU proteome | 0.03 | Archaeplastida | |
| Zm00001e018345_P001 | No alias | component RPS9 of SSU proteome | 0.04 | Archaeplastida | |
| Zm00001e037961_P002 | No alias | component RPS9 of SSU proteome | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
| MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
| MF | GO:0005319 | lipid transporter activity | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005737 | cytoplasm | IEP | Neighborhood |
| CC | GO:0005787 | signal peptidase complex | IEP | Neighborhood |
| BP | GO:0006405 | RNA export from nucleus | IEP | Neighborhood |
| BP | GO:0006406 | mRNA export from nucleus | IEP | Neighborhood |
| BP | GO:0006412 | translation | IEP | Neighborhood |
| BP | GO:0006465 | signal peptide processing | IEP | Neighborhood |
| BP | GO:0006518 | peptide metabolic process | IEP | Neighborhood |
| BP | GO:0006810 | transport | IEP | Neighborhood |
| BP | GO:0006869 | lipid transport | IEP | Neighborhood |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Neighborhood |
| CC | GO:0008541 | proteasome regulatory particle, lid subcomplex | IEP | Neighborhood |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Neighborhood |
| BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
| BP | GO:0016485 | protein processing | IEP | Neighborhood |
| BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Neighborhood |
| BP | GO:0043248 | proteasome assembly | IEP | Neighborhood |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Neighborhood |
| BP | GO:0043604 | amide biosynthetic process | IEP | Neighborhood |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044432 | endoplasmic reticulum part | IEP | Neighborhood |
| CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| BP | GO:0050657 | nucleic acid transport | IEP | Neighborhood |
| BP | GO:0050658 | RNA transport | IEP | Neighborhood |
| BP | GO:0051028 | mRNA transport | IEP | Neighborhood |
| BP | GO:0051168 | nuclear export | IEP | Neighborhood |
| BP | GO:0051169 | nuclear transport | IEP | Neighborhood |
| BP | GO:0051179 | localization | IEP | Neighborhood |
| BP | GO:0051234 | establishment of localization | IEP | Neighborhood |
| BP | GO:0051236 | establishment of RNA localization | IEP | Neighborhood |
| BP | GO:0051604 | protein maturation | IEP | Neighborhood |
| BP | GO:0061024 | membrane organization | IEP | Neighborhood |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Neighborhood |
| BP | GO:0071702 | organic substance transport | IEP | Neighborhood |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
| BP | GO:0120009 | intermembrane lipid transfer | IEP | Neighborhood |
| MF | GO:0120013 | intermembrane lipid transfer activity | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
| CC | GO:1905368 | peptidase complex | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |