Pp3c27_2160V3.1


Description : Translation elongation factor EF1A/initiation factor IF2gamma family protein


Gene families : OG0000191 (Archaeplastida) Phylogenetic Tree(s): OG0000191_tree ,
OG_05_0005380 (LandPlants) Phylogenetic Tree(s): OG_05_0005380_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c27_2160V3.1
Cluster HCCA: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
AT1G18070 No alias Translation elongation factor EF1A/initiation factor... 0.05 Archaeplastida
Cre06.g263450 No alias Elongation factor 1-alpha OS=Glycine max 0.01 Archaeplastida
Cre06.g284750 No alias Protein biosynthesis.translation termination.eRF3... 0.06 Archaeplastida
Cre13.g565750 No alias Elongation factor 1-alpha OS=Vicia faba 0.01 Archaeplastida
Gb_17471 No alias aminoacyl-tRNA binding factor (eEF1A) 0.02 Archaeplastida
LOC_Os03g08010.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.05 Archaeplastida
LOC_Os03g08020.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.02 Archaeplastida
LOC_Os03g08050.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.02 Archaeplastida
LOC_Os04g20220.1 No alias eRF3 peptide release factor 0.03 Archaeplastida
MA_10428053g0010 No alias Elongation factor 1-alpha OS=Solanum lycopersicum... 0.04 Archaeplastida
MA_10430514g0010 No alias No annotation 0.03 Archaeplastida
MA_651220g0010 No alias Elongation factor 1-alpha OS=Oryza sativa subsp.... 0.04 Archaeplastida
MA_7085077g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g00820.1 No alias eRF3 peptide release factor 0.03 Archaeplastida
Mp3g23400.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.02 Archaeplastida
Mp4g00870.1 No alias EXO9-SUPERKILLER interaction factor (SKI7). GTPase... 0.06 Archaeplastida
Pp3c1_23850V3.1 No alias GTP binding Elongation factor Tu family protein 0.03 Archaeplastida
Smo115313 No alias Protein biosynthesis.translation termination.eRF3... 0.02 Archaeplastida
Smo171512 No alias Protein biosynthesis.translation elongation.eEF1A... 0.03 Archaeplastida
Smo230720 No alias Elongation factor 1-alpha OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Smo270693 No alias Protein biosynthesis.translation elongation.eEF1A... 0.03 Archaeplastida
Solyc06g069020.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e008531_P002 No alias eRF3 peptide release factor 0.03 Archaeplastida
Zm00001e040640_P002 No alias eRF3 peptide release factor 0.08 Archaeplastida
Zm00001e041559_P002 No alias EXO9-SUPERKILLER interaction factor (SKI7). GTPase... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0031369 translation initiation factor binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
MF GO:0060090 molecular adaptor activity IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!