1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c27_2940V3.1

Pp3c27_2940V3.1


Description : No annotation


Gene families : OG0006926 (Archaeplastida) Phylogenetic Tree(s): OG0006926_tree ,
OG_05_0005266 (LandPlants) Phylogenetic Tree(s): OG_05_0005266_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c27_2940V3.1
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00196600 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.04 Archaeplastida
AT1G23230 No alias CONTAINS InterPro DOMAIN/s: Mediator complex subunit... 0.05 Archaeplastida
GSVIVT01011680001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.08 Archaeplastida
Gb_41520 No alias component MED23 of tail module of MEDIATOR transcription... 0.04 Archaeplastida
LOC_Os02g49992.1 No alias component MED23 of tail module of MEDIATOR transcription... 0.05 Archaeplastida
MA_10281498g0010 No alias component MED23 of tail module of MEDIATOR transcription... 0.03 Archaeplastida
MA_10430175g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Smo76173 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.04 Archaeplastida
Solyc05g016440.3.1 No alias component MED23 of tail module of MEDIATOR transcription... 0.03 Archaeplastida
Solyc05g016460.2.1 No alias component MED23 of tail module of MEDIATOR transcription... 0.04 Archaeplastida
Zm00001e015737_P001 No alias component MED23 of tail module of MEDIATOR transcription... 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
InterPro domains Description Start Stop
IPR021629 Mediator_Med23 673 1211
No external refs found!