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Description : Pentatricopeptide repeat (PPR) superfamily protein
Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000000 (LandPlants) Phylogenetic Tree(s): OG_05_0000000_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pp3c27_5540V3.1 | |
| Cluster | HCCA: Cluster_23 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00006p00257350 | evm_27.TU.AmTr_v1... | RNA processing.organelle machineries.RNA... | 0.02 | Archaeplastida | |
| AMTR_s00014p00090010 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g13600... | 0.02 | Archaeplastida | |
| AMTR_s00016p00166520 | evm_27.TU.AmTr_v1... | RNA processing.organelle machineries.RNA... | 0.02 | Archaeplastida | |
| AMTR_s00022p00232590 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.02 | Archaeplastida | |
| AMTR_s00066p00131520 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | Archaeplastida | |
| AMTR_s00078p00067180 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g46050,... | 0.03 | Archaeplastida | |
| AMTR_s00439p00010860 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g34400... | 0.03 | Archaeplastida | |
| AT1G22830 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Archaeplastida | |
| AT4G33170 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.01 | Archaeplastida | |
| GSVIVT01009974001 | No alias | Pentatricopeptide repeat-containing protein At3g26540... | 0.02 | Archaeplastida | |
| GSVIVT01021403001 | No alias | Pentatricopeptide repeat-containing protein At3g14730... | 0.01 | Archaeplastida | |
| Gb_38938 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.02 | Archaeplastida | |
| LOC_Os01g58630.1 | No alias | Pentatricopeptide repeat-containing protein At5g15300... | 0.02 | Archaeplastida | |
| LOC_Os03g32620.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | Archaeplastida | |
| LOC_Os04g38980.1 | No alias | Pentatricopeptide repeat-containing protein At4g39952,... | 0.02 | Archaeplastida | |
| LOC_Os05g24150.1 | No alias | Pentatricopeptide repeat-containing protein At2g34400... | 0.02 | Archaeplastida | |
| LOC_Os05g24890.1 | No alias | Pentatricopeptide repeat-containing protein At2g34400... | 0.02 | Archaeplastida | |
| LOC_Os06g41040.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.01 | Archaeplastida | |
| Pp3c11_7720V3.1 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Archaeplastida | |
| Smo103099 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.02 | Archaeplastida | |
| Smo117959 | No alias | Pentatricopeptide repeat-containing protein At4g33990... | 0.03 | Archaeplastida | |
| Smo462 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.01 | Archaeplastida | |
| Smo72257 | No alias | Pentatricopeptide repeat-containing protein At3g49170,... | 0.01 | Archaeplastida | |
| Smo81625 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | Archaeplastida | |
| Smo92231 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | Archaeplastida | |
| Smo93321 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.01 | Archaeplastida | |
| Smo99756 | No alias | Pentatricopeptide repeat-containing protein At2g39620... | 0.02 | Archaeplastida | |
| Solyc01g020340.2.1 | No alias | Pentatricopeptide repeat-containing protein At4g21065... | 0.02 | Archaeplastida | |
| Solyc02g084830.4.1 | No alias | Pentatricopeptide repeat-containing protein At5g44230... | 0.02 | Archaeplastida | |
| Zm00001e014825_P001 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Neighborhood |
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Neighborhood |
| MF | GO:0005215 | transporter activity | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| BP | GO:0006810 | transport | IEP | Neighborhood |
| BP | GO:0006811 | ion transport | IEP | Neighborhood |
| BP | GO:0006812 | cation transport | IEP | Neighborhood |
| BP | GO:0006813 | potassium ion transport | IEP | Neighborhood |
| BP | GO:0007165 | signal transduction | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| MF | GO:0008324 | cation transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015075 | ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015297 | antiporter activity | IEP | Neighborhood |
| MF | GO:0015298 | solute:cation antiporter activity | IEP | Neighborhood |
| MF | GO:0015299 | solute:proton antiporter activity | IEP | Neighborhood |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015405 | P-P-bond-hydrolysis-driven transmembrane transporter activity | IEP | Neighborhood |
| CC | GO:0016021 | integral component of membrane | IEP | Neighborhood |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0030001 | metal ion transport | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| BP | GO:0035556 | intracellular signal transduction | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| MF | GO:0042623 | ATPase activity, coupled | IEP | Neighborhood |
| MF | GO:0042626 | ATPase activity, coupled to transmembrane movement of substances | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| MF | GO:0043492 | ATPase activity, coupled to movement of substances | IEP | Neighborhood |
| CC | GO:0044425 | membrane part | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051179 | localization | IEP | Neighborhood |
| BP | GO:0051234 | establishment of localization | IEP | Neighborhood |
| BP | GO:0055085 | transmembrane transport | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |