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  5. Pp3c27_7320V3.1

Pp3c27_7320V3.1


Description : Alanyl-tRNA synthetase


Gene families : OG0001306 (Archaeplastida) Phylogenetic Tree(s): OG0001306_tree ,
OG_05_0001493 (LandPlants) Phylogenetic Tree(s): OG_05_0001493_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c27_7320V3.1
Cluster HCCA: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
AT5G22800 EMB86, EMB1030, EMB263 Alanyl-tRNA synthetase, class IIc 0.03 Archaeplastida
GSVIVT01023918001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 Archaeplastida
Gb_36215 No alias alanine-tRNA ligase 0.03 Archaeplastida
LOC_Os06g13660.1 No alias alanine-tRNA ligase 0.03 Archaeplastida
LOC_Os10g10244.1 No alias alanine-tRNA ligase 0.03 Archaeplastida
MA_10282308g0010 No alias alanine-tRNA ligase 0.02 Archaeplastida
MA_10436405g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp1g23620.1 No alias alanine-tRNA ligase 0.03 Archaeplastida
Solyc01g111990.3.1 No alias alanine-tRNA ligase 0.02 Archaeplastida
Zm00001e036036_P002 No alias alanine-tRNA ligase 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!