Description : PNAS-3 related

Gene families : OG0005639 (Archaeplastida) Phylogenetic Tree(s): OG0005639_tree ,
OG_05_0006509 (LandPlants) Phylogenetic Tree(s): OG_05_0006509_tree ,
OG_06_0006053 (SeedPlants) Phylogenetic Tree(s): OG_06_0006053_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AT4G32175
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000361.52 No alias RNA processing.RNA decay.exosome complex.EXO9 core... 0.02 Archaeplastida
Solyc06g071460.3.1 No alias component RRP40 of exosome EXO9 core complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast ISM Interproscan
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
BP GO:0006826 iron ion transport IEP Neighborhood
MF GO:0008265 Mo-molybdopterin cofactor sulfurase activity IEP Neighborhood
CC GO:0009526 plastid envelope IEP Neighborhood
BP GO:0009657 plastid organization IEP Neighborhood
BP GO:0009658 chloroplast organization IEP Neighborhood
CC GO:0009941 chloroplast envelope IEP Neighborhood
BP GO:0010020 chloroplast fission IEP Neighborhood
BP GO:0010039 response to iron ion IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016783 sulfurtransferase activity IEP Neighborhood
MF GO:0030899 calcium-dependent ATPase activity IEP Neighborhood
CC GO:0031967 organelle envelope IEP Neighborhood
CC GO:0031975 envelope IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
BP GO:0043572 plastid fission IEP Neighborhood
CC GO:0044434 chloroplast part IEP Neighborhood
CC GO:0044435 plastid part IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048285 organelle fission IEP Neighborhood
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 159 208
No external refs found!