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  5. Pp3c27_8050V3.1

Pp3c27_8050V3.1


Description : ROOT HAIR DEFECTIVE 6-LIKE 2


Gene families : OG0000092 (Archaeplastida) Phylogenetic Tree(s): OG0000092_tree ,
OG_05_0000040 (LandPlants) Phylogenetic Tree(s): OG_05_0000040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c27_8050V3.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AT1G66470 RHD6 ROOT HAIR DEFECTIVE6 0.05 Archaeplastida
AT5G37800 ATRSL1, RSL1 RHD SIX-LIKE 1 0.04 Archaeplastida
GSVIVT01026516001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
GSVIVT01028238001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01031338001 No alias External stimuli response.light.red/far red light.PIF... 0.02 Archaeplastida
Gb_07156 No alias transcription factor (bHLH). PIF red/far-red light... 0.02 Archaeplastida
LOC_Os03g10770.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os05g04740.2 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os07g39940.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os09g28210.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_100071g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c3_8460V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.04 Archaeplastida
Solyc02g091440.2.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc03g044460.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc04g077960.1.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc04g078690.3.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc11g005780.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e015610_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!