Pp3c2_10280V3.1

Description : RAB GTPase homolog A2B

Gene families : OG0000173 (Archaeplastida) Phylogenetic Tree(s): OG0000173_tree ,
OG_05_0000161 (LandPlants) Phylogenetic Tree(s): OG_05_0000161_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c2_10280V3.1
Cluster	HCCA: Cluster_287

Target	Alias	Description	ECC score	Gene Family Method
AT1G07410	RABA2b,...	RAB GTPase homolog A2B	0.02	Archaeplastida
AT1G09630	ATRABA2A,...	RAB GTPase 11C	0.02	Archaeplastida
AT5G65270	AtRABA4a, RABA4a	RAB GTPase homolog A4A	0.03	Archaeplastida
Cre03.g189250	No alias	Vesicle trafficking.regulation of membrane tethering and...	0.05	Archaeplastida
GSVIVT01021253001	No alias	Vesicle trafficking.regulation of membrane tethering and...	0.03	Archaeplastida
Gb_37703	No alias	A-class RAB GTPase	0.02	Archaeplastida
LOC_Os03g60870.1	No alias	A-class RAB GTPase	0.04	Archaeplastida
LOC_Os05g01480.1	No alias	A-class RAB GTPase	0.02	Archaeplastida
LOC_Os05g44070.1	No alias	A-class RAB GTPase	0.03	Archaeplastida
LOC_Os10g23100.1	No alias	A-class RAB GTPase	0.05	Archaeplastida
MA_109703g0010	No alias	A-class RAB GTPase	0.02	Archaeplastida
Solyc01g103380.4.1	No alias	A-class RAB GTPase	0.01	Archaeplastida
Solyc10g045550.2.1	No alias	A-class RAB GTPase	0.02	Archaeplastida
Zm00001e009615_P001	No alias	A-class RAB GTPase	0.02	Archaeplastida
Zm00001e011737_P001	No alias	A-class RAB GTPase	0.03	Archaeplastida
Zm00001e012878_P002	No alias	A-class RAB GTPase	0.01	Archaeplastida
Zm00001e030680_P001	No alias	A-class RAB GTPase	0.04	Archaeplastida
Zm00001e037250_P001	No alias	A-class RAB GTPase	0.03	Archaeplastida
Zm00001e038828_P001	No alias	A-class RAB GTPase	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005509	calcium ion binding	IEP	Neighborhood
BP	GO:0006275	regulation of DNA replication	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Neighborhood
BP	GO:0051052	regulation of DNA metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	14	174

External Links

No external refs found!