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  5. Pp3c2_10320V3.1

Pp3c2_10320V3.1


Description : RmlC-like cupins superfamily protein


Gene families : OG0001830 (Archaeplastida) Phylogenetic Tree(s): OG0001830_tree ,
OG_05_0002011 (LandPlants) Phylogenetic Tree(s): OG_05_0002011_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_10320V3.1
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AT1G50590 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
AT2G43120 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
AT3G59220 PRN, PRN1, ATPIRIN1 pirin 0.03 Archaeplastida
Cre16.g674964 No alias Pirin-like protein OS=Solanum lycopersicum 0.03 Archaeplastida
GSVIVT01038385001 No alias Pirin-like protein OS=Solanum lycopersicum 0.07 Archaeplastida
LOC_Os08g27720.1 No alias Pirin-like protein OS=Solanum lycopersicum... 0.04 Archaeplastida
Mp5g19670.1 No alias Pirin-like protein OS=Solanum lycopersicum... 0.04 Archaeplastida
Smo446995 No alias Pirin-like protein OS=Solanum lycopersicum 0.03 Archaeplastida
Zm00001e034512_P001 No alias Pirin-like protein At1g50590 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004357 glutamate-cysteine ligase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0008198 ferrous iron binding IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016881 acid-amino acid ligase activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR008778 Pirin_C_dom 230 335
IPR003829 Pirin_N_dom 83 177
No external refs found!