Pp3c2_10910V3.1


Description : DNA-directed RNA polymerase family protein


Gene families : OG0000520 (Archaeplastida) Phylogenetic Tree(s): OG0000520_tree ,
OG_05_0003743 (LandPlants) Phylogenetic Tree(s): OG_05_0003743_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_10910V3.1
Cluster HCCA: Cluster_286

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00020p00246930 evm_27.TU.AmTr_v1... RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... 0.03 Archaeplastida
AMTR_s00068p00181410 evm_27.TU.AmTr_v1... RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... 0.03 Archaeplastida
AT4G21710 EMB1989, RPB2, NRPB2 DNA-directed RNA polymerase family protein 0.02 Archaeplastida
Cpa|evm.model.tig00000158.16 No alias RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... 0.03 Archaeplastida
Cre02.g075150 No alias RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... 0.02 Archaeplastida
GSVIVT01020543001 No alias RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... 0.04 Archaeplastida
GSVIVT01036596001 No alias DNA-directed RNA polymerase III subunit 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_30006 No alias subunit 2 of Pol II RNA polymerase 0.02 Archaeplastida
LOC_Os03g28960.1 No alias DNA-directed RNA polymerase III subunit 2 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os03g44484.1 No alias DNA-directed RNA polymerase II subunit RPB2 OS=Solanum... 0.03 Archaeplastida
MA_10429035g0020 No alias subunit 2 of Pol II RNA polymerase 0.03 Archaeplastida
MA_10429035g0030 No alias DNA-directed RNA polymerase II subunit 2 OS=Arabidopsis... 0.02 Archaeplastida
Mp4g21160.1 No alias subunit 2 of Pol II RNA polymerase 0.04 Archaeplastida
Mp6g06170.1 No alias subunit 2 of Pol III RNA polymerase 0.02 Archaeplastida
Smo148107 No alias RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... 0.02 Archaeplastida
Smo443461 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
Zm00001e012400_P001 No alias subunit 2 of Pol II RNA polymerase 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
MF GO:0060090 molecular adaptor activity IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!