Pp3c2_14560V3.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG0002977 (Archaeplastida) Phylogenetic Tree(s): OG0002977_tree ,
OG_05_0002339 (LandPlants) Phylogenetic Tree(s): OG_05_0002339_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_14560V3.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00179p00033790 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT1G04080 PRP39 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
AT5G46400 AT PRP39-2, PRP39-2 Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Archaeplastida
Cre16.g670300 No alias No description available 0.04 Archaeplastida
GSVIVT01028421001 No alias No description available 0.02 Archaeplastida
GSVIVT01028422001 No alias No description available 0.02 Archaeplastida
Gb_33527 No alias pre-mRNA-processing protein (PRP39) 0.02 Archaeplastida
LOC_Os03g11200.1 No alias pre-mRNA-processing protein (PRP39) 0.03 Archaeplastida
Smo109541 No alias Cleavage stimulation factor subunit 77 OS=Arabidopsis thaliana 0.03 Archaeplastida
Zm00001e000702_P004 No alias pre-mRNA-processing protein (PRP39) 0.03 Archaeplastida
Zm00001e038749_P003 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030126 COPI vesicle coat IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0031369 translation initiation factor binding IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!