Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG0002977 (Archaeplastida) Phylogenetic Tree(s): OG0002977_tree ,
OG_05_0002339 (LandPlants) Phylogenetic Tree(s): OG_05_0002339_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pp3c2_14560V3.1 | |
Cluster | HCCA: Cluster_8 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00179p00033790 | evm_27.TU.AmTr_v1... | No description available | 0.02 | Archaeplastida | |
AT1G04080 | PRP39 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Archaeplastida | |
AT5G46400 | AT PRP39-2, PRP39-2 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Archaeplastida | |
Cre16.g670300 | No alias | No description available | 0.04 | Archaeplastida | |
GSVIVT01028421001 | No alias | No description available | 0.02 | Archaeplastida | |
GSVIVT01028422001 | No alias | No description available | 0.02 | Archaeplastida | |
Gb_33527 | No alias | pre-mRNA-processing protein (PRP39) | 0.02 | Archaeplastida | |
LOC_Os03g11200.1 | No alias | pre-mRNA-processing protein (PRP39) | 0.03 | Archaeplastida | |
Smo109541 | No alias | Cleavage stimulation factor subunit 77 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
Zm00001e000702_P004 | No alias | pre-mRNA-processing protein (PRP39) | 0.03 | Archaeplastida | |
Zm00001e038749_P003 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003743 | translation initiation factor activity | IEP | Neighborhood |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Neighborhood |
BP | GO:0006413 | translational initiation | IEP | Neighborhood |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Neighborhood |
MF | GO:0008483 | transaminase activity | IEP | Neighborhood |
BP | GO:0016192 | vesicle-mediated transport | IEP | Neighborhood |
MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Neighborhood |
MF | GO:0019842 | vitamin binding | IEP | Neighborhood |
CC | GO:0030117 | membrane coat | IEP | Neighborhood |
CC | GO:0030120 | vesicle coat | IEP | Neighborhood |
CC | GO:0030126 | COPI vesicle coat | IEP | Neighborhood |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | Neighborhood |
MF | GO:0031369 | translation initiation factor binding | IEP | Neighborhood |
CC | GO:0044431 | Golgi apparatus part | IEP | Neighborhood |
CC | GO:0044433 | cytoplasmic vesicle part | IEP | Neighborhood |
MF | GO:0070279 | vitamin B6 binding | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
No InterPro domains available for this sequence
No external refs found! |