Pp3c2_16490V3.1

Description : Ribosomal protein L31e family protein

Gene families : OG0002465 (Archaeplastida) Phylogenetic Tree(s): OG0002465_tree ,
OG_05_0002610 (LandPlants) Phylogenetic Tree(s): OG_05_0002610_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c2_16490V3.1
Cluster	HCCA: Cluster_192

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00022p00230660	evm_27.TU.AmTr_v1...	No description available	0.05	Archaeplastida
AMTR_s00022p00233860	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.24	Archaeplastida
AT2G19740	No alias	Ribosomal protein L31e family protein	0.05	Archaeplastida
AT4G26230	No alias	Ribosomal protein L31e family protein	0.06	Archaeplastida
AT5G56710	No alias	Ribosomal protein L31e family protein	0.17	Archaeplastida
Cpa\|evm.model.tig00020703.20	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.3	Archaeplastida
Cre12.g489153	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.41	Archaeplastida
GSVIVT01015251001	No alias	60S ribosomal protein L31 OS=Nicotiana glutinosa	0.28	Archaeplastida
GSVIVT01032061001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.17	Archaeplastida
Gb_05851	No alias	component RPL31 of LSU proteome component	0.12	Archaeplastida
Gb_24728	No alias	component RPL31 of LSU proteome component	0.19	Archaeplastida
LOC_Os02g48660.1	No alias	component RPL31 of LSU proteome component	0.19	Archaeplastida
LOC_Os06g21480.1	No alias	component RPL31 of LSU proteome component	0.02	Archaeplastida
LOC_Os08g39500.1	No alias	component RPL31 of LSU proteome component	0.07	Archaeplastida
MA_14317g0010	No alias	component RPL31 of LSU proteome component	0.13	Archaeplastida
MA_8286g0010	No alias	component RPL31 of LSU proteome component	0.02	Archaeplastida
Mp7g18320.1	No alias	component RPL31 of LSU proteome component	0.35	Archaeplastida
Smo268515	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.21	Archaeplastida
Solyc05g008010.3.1	No alias	component RPL31 of LSU proteome component	0.36	Archaeplastida
Solyc12g008720.2.1	No alias	component RPL31 of LSU proteome component	0.34	Archaeplastida
Zm00001e003520_P001	No alias	component RPL31 of LSU proteome component	0.13	Archaeplastida
Zm00001e023413_P001	No alias	component RPL31 of LSU proteome component	0.22	Archaeplastida
Zm00001e036927_P001	No alias	component RPL31 of LSU proteome component	0.23	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
CC	GO:0015934	large ribosomal subunit	IEP	Neighborhood
MF	GO:0019843	rRNA binding	IEP	Neighborhood
CC	GO:0044391	ribosomal subunit	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000054	Ribosomal_L31e	11	92

External Links

No external refs found!

Pp3c2_16490V3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation