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  5. Pp3c2_16660V3.1

Pp3c2_16660V3.1


Description : Sec23/Sec24 protein transport family protein


Gene families : OG0001187 (Archaeplastida) Phylogenetic Tree(s): OG0001187_tree ,
OG_05_0003933 (LandPlants) Phylogenetic Tree(s): OG_05_0003933_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_16660V3.1
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00084390 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 Archaeplastida
AMTR_s00071p00045940 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 Archaeplastida
AT3G44340 CEF clone eighty-four 0.03 Archaeplastida
AT4G32640 No alias Sec23/Sec24 protein transport family protein 0.02 Archaeplastida
Cpa|evm.model.tig00000829.3 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.01 Archaeplastida
Cre01.g035850 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 Archaeplastida
Cre02.g091150 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.01 Archaeplastida
GSVIVT01014261001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.05 Archaeplastida
GSVIVT01014611001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 Archaeplastida
Gb_11357 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.03 Archaeplastida
Gb_26869 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.02 Archaeplastida
Gb_38621 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.03 Archaeplastida
LOC_Os04g04020.1 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.03 Archaeplastida
MA_10430919g0010 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.03 Archaeplastida
MA_10434705g0010 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.05 Archaeplastida
MA_923164g0010 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.03 Archaeplastida
Mp7g13560.1 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.02 Archaeplastida
Smo140536 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 Archaeplastida
Smo157789 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 Archaeplastida
Solyc02g082220.3.1 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.04 Archaeplastida
Solyc06g084210.3.1 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.04 Archaeplastida
Zm00001e008766_P001 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.06 Archaeplastida
Zm00001e021459_P002 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.03 Archaeplastida
Zm00001e040573_P001 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!