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  5. Pp3c2_1760V3.1

Pp3c2_1760V3.1


Description : RECQ helicase L4B


Gene families : OG0000499 (Archaeplastida) Phylogenetic Tree(s): OG0000499_tree ,
OG_05_0006417 (LandPlants) Phylogenetic Tree(s): OG_05_0006417_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_1760V3.1
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00186260 evm_27.TU.AmTr_v1... ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00118p00027960 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.meiotic... 0.03 Archaeplastida
AT4G35740 RecQl3, ATRECQ3 DEAD/DEAH box RNA helicase family protein 0.03 Archaeplastida
Cpa|evm.model.tig00000615.26 No alias ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana 0.01 Archaeplastida
Cpa|evm.model.tig00020961.28 No alias ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cre04.g219750 No alias Cell cycle.mitosis and meiosis.meiotic... 0.02 Archaeplastida
Cre12.g490150 No alias ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01023325001 No alias Cell cycle.mitosis and meiosis.meiotic... 0.03 Archaeplastida
GSVIVT01036944001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 Archaeplastida
Gb_08699 No alias ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis... 0.06 Archaeplastida
Gb_33079 No alias helicase component RecQ4A of RTR Holliday junction... 0.02 Archaeplastida
LOC_Os04g35420.1 No alias helicase component RecQ4A of RTR Holliday junction... 0.06 Archaeplastida
LOC_Os07g48360.1 No alias Mediator of RNA polymerase II transcription subunit 34... 0.03 Archaeplastida
LOC_Os11g44910.1 No alias ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis... 0.02 Archaeplastida
MA_10435954g0010 No alias ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis... 0.02 Archaeplastida
MA_10436537g0010 No alias helicase component RecQ4A of RTR Holliday junction... 0.06 Archaeplastida
MA_30494g0010 No alias ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis... 0.02 Archaeplastida
MA_387725g0010 No alias ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis... 0.02 Archaeplastida
Mp4g14290.1 No alias helicase component RecQ4A of RTR Holliday junction... 0.05 Archaeplastida
Mp4g16510.1 No alias ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis... 0.02 Archaeplastida
Solyc01g100280.4.1 No alias ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis... 0.05 Archaeplastida
Solyc01g103960.3.1 No alias helicase component RecQ4A of RTR Holliday junction... 0.04 Archaeplastida
Solyc09g018690.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e013615_P001 No alias helicase component RecQ4A of RTR Holliday junction... 0.02 Archaeplastida
Zm00001e035873_P003 No alias ATP-dependent DNA helicase Q-like 4B OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!