| CC | GO:0000159 | protein phosphatase type 2A complex | IEP | Neighborhood |
| BP | GO:0000226 | microtubule cytoskeleton organization | IEP | Neighborhood |
| BP | GO:0000902 | cell morphogenesis | IEP | Neighborhood |
| BP | GO:0000904 | cell morphogenesis involved in differentiation | IEP | Neighborhood |
| BP | GO:0000911 | cytokinesis by cell plate formation | IEP | Neighborhood |
| BP | GO:0001763 | morphogenesis of a branching structure | IEP | Neighborhood |
| BP | GO:0002252 | immune effector process | IEP | Neighborhood |
| BP | GO:0002376 | immune system process | IEP | Neighborhood |
| BP | GO:0003006 | developmental process involved in reproduction | IEP | Neighborhood |
| MF | GO:0003724 | RNA helicase activity | IEP | Neighborhood |
| MF | GO:0003727 | single-stranded RNA binding | IEP | Neighborhood |
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Neighborhood |
| MF | GO:0004386 | helicase activity | IEP | Neighborhood |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | Neighborhood |
| MF | GO:0004521 | endoribonuclease activity | IEP | Neighborhood |
| MF | GO:0004525 | ribonuclease III activity | IEP | Neighborhood |
| MF | GO:0005451 | monovalent cation:proton antiporter activity | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006260 | DNA replication | IEP | Neighborhood |
| BP | GO:0006304 | DNA modification | IEP | Neighborhood |
| BP | GO:0006305 | DNA alkylation | IEP | Neighborhood |
| BP | GO:0006306 | DNA methylation | IEP | Neighborhood |
| BP | GO:0006325 | chromatin organization | IEP | Neighborhood |
| BP | GO:0006342 | chromatin silencing | IEP | Neighborhood |
| BP | GO:0006353 | DNA-templated transcription, termination | IEP | Neighborhood |
| BP | GO:0006396 | RNA processing | IEP | Neighborhood |
| BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
| BP | GO:0006473 | protein acetylation | IEP | Neighborhood |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | Neighborhood |
| BP | GO:0006476 | protein deacetylation | IEP | Neighborhood |
| BP | GO:0006479 | protein methylation | IEP | Neighborhood |
| BP | GO:0006482 | protein demethylation | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0006955 | immune response | IEP | Neighborhood |
| BP | GO:0007015 | actin filament organization | IEP | Neighborhood |
| BP | GO:0007017 | microtubule-based process | IEP | Neighborhood |
| BP | GO:0007154 | cell communication | IEP | Neighborhood |
| BP | GO:0007155 | cell adhesion | IEP | Neighborhood |
| BP | GO:0007267 | cell-cell signaling | IEP | Neighborhood |
| BP | GO:0007275 | multicellular organism development | IEP | Neighborhood |
| BP | GO:0007389 | pattern specification process | IEP | Neighborhood |
| BP | GO:0008064 | regulation of actin polymerization or depolymerization | IEP | Neighborhood |
| MF | GO:0008131 | primary amine oxidase activity | IEP | Neighborhood |
| MF | GO:0008187 | poly-pyrimidine tract binding | IEP | Neighborhood |
| BP | GO:0008213 | protein alkylation | IEP | Neighborhood |
| BP | GO:0008214 | protein dealkylation | IEP | Neighborhood |
| MF | GO:0008266 | poly(U) RNA binding | IEP | Neighborhood |
| BP | GO:0008283 | cell proliferation | IEP | Neighborhood |
| CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | Neighborhood |
| MF | GO:0008327 | methyl-CpG binding | IEP | Neighborhood |
| CC | GO:0008622 | epsilon DNA polymerase complex | IEP | Neighborhood |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0009615 | response to virus | IEP | Neighborhood |
| BP | GO:0009616 | virus induced gene silencing | IEP | Neighborhood |
| BP | GO:0009653 | anatomical structure morphogenesis | IEP | Neighborhood |
| BP | GO:0009790 | embryo development | IEP | Neighborhood |
| BP | GO:0009791 | post-embryonic development | IEP | Neighborhood |
| BP | GO:0009793 | embryo development ending in seed dormancy | IEP | Neighborhood |
| BP | GO:0009799 | specification of symmetry | IEP | Neighborhood |
| BP | GO:0009855 | determination of bilateral symmetry | IEP | Neighborhood |
| BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0009909 | regulation of flower development | IEP | Neighborhood |
| BP | GO:0009911 | positive regulation of flower development | IEP | Neighborhood |
| BP | GO:0010014 | meristem initiation | IEP | Neighborhood |
| BP | GO:0010050 | vegetative phase change | IEP | Neighborhood |
| BP | GO:0010053 | root epidermal cell differentiation | IEP | Neighborhood |
| BP | GO:0010072 | primary shoot apical meristem specification | IEP | Neighborhood |
| BP | GO:0010086 | embryonic root morphogenesis | IEP | Neighborhood |
| BP | GO:0010090 | trichome morphogenesis | IEP | Neighborhood |
| BP | GO:0010216 | maintenance of DNA methylation | IEP | Neighborhood |
| BP | GO:0010223 | secondary shoot formation | IEP | Neighborhood |
| BP | GO:0010228 | vegetative to reproductive phase transition of meristem | IEP | Neighborhood |
| BP | GO:0010229 | inflorescence development | IEP | Neighborhood |
| BP | GO:0010267 | production of ta-siRNAs involved in RNA interference | IEP | Neighborhood |
| BP | GO:0010346 | shoot axis formation | IEP | Neighborhood |
| MF | GO:0010348 | lithium:proton antiporter activity | IEP | Neighborhood |
| BP | GO:0010351 | lithium ion transport | IEP | Neighborhood |
| BP | GO:0010352 | lithium ion export across the plasma membrane | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0010599 | production of lsiRNA involved in RNA interference | IEP | Neighborhood |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010638 | positive regulation of organelle organization | IEP | Neighborhood |
| BP | GO:0010639 | negative regulation of organelle organization | IEP | Neighborhood |
| MF | GO:0015385 | sodium:proton antiporter activity | IEP | Neighborhood |
| BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| MF | GO:0016160 | amylase activity | IEP | Neighborhood |
| MF | GO:0016161 | beta-amylase activity | IEP | Neighborhood |
| BP | GO:0016458 | gene silencing | IEP | Neighborhood |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Neighborhood |
| BP | GO:0016569 | covalent chromatin modification | IEP | Neighborhood |
| BP | GO:0016570 | histone modification | IEP | Neighborhood |
| BP | GO:0016571 | histone methylation | IEP | Neighborhood |
| BP | GO:0016573 | histone acetylation | IEP | Neighborhood |
| BP | GO:0016575 | histone deacetylation | IEP | Neighborhood |
| BP | GO:0016577 | histone demethylation | IEP | Neighborhood |
| MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | Neighborhood |
| MF | GO:0016641 | oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor | IEP | Neighborhood |
| MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Neighborhood |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Neighborhood |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Neighborhood |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Neighborhood |
| MF | GO:0016929 | SUMO-specific protease activity | IEP | Neighborhood |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Neighborhood |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | Neighborhood |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | Neighborhood |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | Neighborhood |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | Neighborhood |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
| MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Neighborhood |
| BP | GO:0021700 | developmental maturation | IEP | Neighborhood |
| BP | GO:0022402 | cell cycle process | IEP | Neighborhood |
| BP | GO:0022414 | reproductive process | IEP | Neighborhood |
| BP | GO:0022610 | biological adhesion | IEP | Neighborhood |
| BP | GO:0023052 | signaling | IEP | Neighborhood |
| BP | GO:0030422 | production of siRNA involved in RNA interference | IEP | Neighborhood |
| BP | GO:0030832 | regulation of actin filament length | IEP | Neighborhood |
| BP | GO:0030833 | regulation of actin filament polymerization | IEP | Neighborhood |
| BP | GO:0030838 | positive regulation of actin filament polymerization | IEP | Neighborhood |
| BP | GO:0031047 | gene silencing by RNA | IEP | Neighborhood |
| BP | GO:0031050 | dsRNA fragmentation | IEP | Neighborhood |
| BP | GO:0031056 | regulation of histone modification | IEP | Neighborhood |
| BP | GO:0031057 | negative regulation of histone modification | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0031334 | positive regulation of protein complex assembly | IEP | Neighborhood |
| BP | GO:0031935 | regulation of chromatin silencing | IEP | Neighborhood |
| BP | GO:0032259 | methylation | IEP | Neighborhood |
| BP | GO:0032271 | regulation of protein polymerization | IEP | Neighborhood |
| BP | GO:0032273 | positive regulation of protein polymerization | IEP | Neighborhood |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Neighborhood |
| BP | GO:0032501 | multicellular organismal process | IEP | Neighborhood |
| BP | GO:0032502 | developmental process | IEP | Neighborhood |
| BP | GO:0032506 | cytokinetic process | IEP | Neighborhood |
| BP | GO:0032535 | regulation of cellular component size | IEP | Neighborhood |
| BP | GO:0032956 | regulation of actin cytoskeleton organization | IEP | Neighborhood |
| BP | GO:0032970 | regulation of actin filament-based process | IEP | Neighborhood |
| BP | GO:0032989 | cellular component morphogenesis | IEP | Neighborhood |
| BP | GO:0033043 | regulation of organelle organization | IEP | Neighborhood |
| BP | GO:0033044 | regulation of chromosome organization | IEP | Neighborhood |
| BP | GO:0033169 | histone H3-K9 demethylation | IEP | Neighborhood |
| MF | GO:0034061 | DNA polymerase activity | IEP | Neighborhood |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0034968 | histone lysine methylation | IEP | Neighborhood |
| BP | GO:0035065 | regulation of histone acetylation | IEP | Neighborhood |
| BP | GO:0035067 | negative regulation of histone acetylation | IEP | Neighborhood |
| BP | GO:0035196 | production of miRNAs involved in gene silencing by miRNA | IEP | Neighborhood |
| BP | GO:0035601 | protein deacylation | IEP | Neighborhood |
| BP | GO:0035821 | modification of morphology or physiology of other organism | IEP | Neighborhood |
| BP | GO:0036211 | protein modification process | IEP | Neighborhood |
| BP | GO:0040029 | regulation of gene expression, epigenetic | IEP | Neighborhood |
| MF | GO:0042393 | histone binding | IEP | Neighborhood |
| CC | GO:0042575 | DNA polymerase complex | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0043254 | regulation of protein complex assembly | IEP | Neighborhood |
| BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
| BP | GO:0043414 | macromolecule methylation | IEP | Neighborhood |
| BP | GO:0043966 | histone H3 acetylation | IEP | Neighborhood |
| BP | GO:0043967 | histone H4 acetylation | IEP | Neighborhood |
| BP | GO:0044003 | modification by symbiont of host morphology or physiology | IEP | Neighborhood |
| BP | GO:0044087 | regulation of cellular component biogenesis | IEP | Neighborhood |
| BP | GO:0044089 | positive regulation of cellular component biogenesis | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
| BP | GO:0044419 | interspecies interaction between organisms | IEP | Neighborhood |
| CC | GO:0044454 | nuclear chromosome part | IEP | Neighborhood |
| BP | GO:0044728 | DNA methylation or demethylation | IEP | Neighborhood |
| BP | GO:0045010 | actin nucleation | IEP | Neighborhood |
| BP | GO:0045087 | innate immune response | IEP | Neighborhood |
| BP | GO:0045814 | negative regulation of gene expression, epigenetic | IEP | Neighborhood |
| BP | GO:0045892 | negative regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0045934 | negative regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0048366 | leaf development | IEP | Neighborhood |
| BP | GO:0048469 | cell maturation | IEP | Neighborhood |
| BP | GO:0048518 | positive regulation of biological process | IEP | Neighborhood |
| BP | GO:0048519 | negative regulation of biological process | IEP | Neighborhood |
| BP | GO:0048523 | negative regulation of cellular process | IEP | Neighborhood |
| BP | GO:0048579 | negative regulation of long-day photoperiodism, flowering | IEP | Neighborhood |
| BP | GO:0048580 | regulation of post-embryonic development | IEP | Neighborhood |
| BP | GO:0048586 | regulation of long-day photoperiodism, flowering | IEP | Neighborhood |
| BP | GO:0048598 | embryonic morphogenesis | IEP | Neighborhood |
| BP | GO:0048646 | anatomical structure formation involved in morphogenesis | IEP | Neighborhood |
| BP | GO:0048764 | trichoblast maturation | IEP | Neighborhood |
| BP | GO:0048765 | root hair cell differentiation | IEP | Neighborhood |
| BP | GO:0048827 | phyllome development | IEP | Neighborhood |
| BP | GO:0048831 | regulation of shoot system development | IEP | Neighborhood |
| BP | GO:0048856 | anatomical structure development | IEP | Neighborhood |
| BP | GO:0048869 | cellular developmental process | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050793 | regulation of developmental process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051128 | regulation of cellular component organization | IEP | Neighborhood |
| BP | GO:0051129 | negative regulation of cellular component organization | IEP | Neighborhood |
| BP | GO:0051130 | positive regulation of cellular component organization | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051225 | spindle assembly | IEP | Neighborhood |
| BP | GO:0051239 | regulation of multicellular organismal process | IEP | Neighborhood |
| BP | GO:0051253 | negative regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0051493 | regulation of cytoskeleton organization | IEP | Neighborhood |
| BP | GO:0051495 | positive regulation of cytoskeleton organization | IEP | Neighborhood |
| BP | GO:0051567 | histone H3-K9 methylation | IEP | Neighborhood |
| BP | GO:0051607 | defense response to virus | IEP | Neighborhood |
| BP | GO:0051701 | interaction with host | IEP | Neighborhood |
| BP | GO:0051707 | response to other organism | IEP | Neighborhood |
| BP | GO:0051817 | modification of morphology or physiology of other organism involved in symbiotic interaction | IEP | Neighborhood |
| BP | GO:0052018 | modulation by symbiont of RNA levels in host | IEP | Neighborhood |
| BP | GO:0052249 | modulation of RNA levels in other organism involved in symbiotic interaction | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0060968 | regulation of gene silencing | IEP | Neighborhood |
| BP | GO:0061647 | histone H3-K9 modification | IEP | Neighborhood |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Neighborhood |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0070076 | histone lysine demethylation | IEP | Neighborhood |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Neighborhood |
| BP | GO:0070918 | production of small RNA involved in gene silencing by RNA | IEP | Neighborhood |
| BP | GO:0070988 | demethylation | IEP | Neighborhood |
| BP | GO:0071695 | anatomical structure maturation | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| BP | GO:0080188 | RNA-directed DNA methylation | IEP | Neighborhood |
| BP | GO:0090066 | regulation of anatomical structure size | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| BP | GO:0090342 | regulation of cell aging | IEP | Neighborhood |
| BP | GO:0090627 | plant epidermal cell differentiation | IEP | Neighborhood |
| BP | GO:0097435 | supramolecular fiber organization | IEP | Neighborhood |
| BP | GO:0098542 | defense response to other organism | IEP | Neighborhood |
| BP | GO:0098586 | cellular response to virus | IEP | Neighborhood |
| BP | GO:0098732 | macromolecule deacylation | IEP | Neighborhood |
| BP | GO:0110053 | regulation of actin filament organization | IEP | Neighborhood |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
| BP | GO:0140115 | export across plasma membrane | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:1901983 | regulation of protein acetylation | IEP | Neighborhood |
| BP | GO:1901984 | negative regulation of protein acetylation | IEP | Neighborhood |
| BP | GO:1902275 | regulation of chromatin organization | IEP | Neighborhood |
| BP | GO:1902410 | mitotic cytokinetic process | IEP | Neighborhood |
| BP | GO:1902679 | negative regulation of RNA biosynthetic process | IEP | Neighborhood |
| BP | GO:1902903 | regulation of supramolecular fiber organization | IEP | Neighborhood |
| BP | GO:1902905 | positive regulation of supramolecular fiber organization | IEP | Neighborhood |
| BP | GO:1903047 | mitotic cell cycle process | IEP | Neighborhood |
| CC | GO:1903293 | phosphatase complex | IEP | Neighborhood |
| BP | GO:1903507 | negative regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:1905268 | negative regulation of chromatin organization | IEP | Neighborhood |
| BP | GO:1905393 | plant organ formation | IEP | Neighborhood |
| BP | GO:2000026 | regulation of multicellular organismal development | IEP | Neighborhood |
| BP | GO:2000028 | regulation of photoperiodism, flowering | IEP | Neighborhood |
| BP | GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2000241 | regulation of reproductive process | IEP | Neighborhood |
| BP | GO:2000756 | regulation of peptidyl-lysine acetylation | IEP | Neighborhood |
| BP | GO:2000757 | negative regulation of peptidyl-lysine acetylation | IEP | Neighborhood |
| BP | GO:2001251 | negative regulation of chromosome organization | IEP | Neighborhood |
