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  5. Pp3c2_24840V3.1

Pp3c2_24840V3.1


Description : DDB1-CUL4 associated factor 1


Gene families : OG0005040 (Archaeplastida) Phylogenetic Tree(s): OG0005040_tree ,
OG_05_0004694 (LandPlants) Phylogenetic Tree(s): OG_05_0004694_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_24840V3.1
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00130610 evm_27.TU.AmTr_v1... DDB1- and CUL4-associated factor homolog 1... 0.06 Archaeplastida
AT4G31160 DCAF1 DDB1-CUL4 associated factor 1 0.1 Archaeplastida
Cre17.g725450 No alias DDB1- and CUL4-associated factor homolog 1... 0.03 Archaeplastida
GSVIVT01035587001 No alias DDB1- and CUL4-associated factor homolog 1... 0.07 Archaeplastida
Gb_32239 No alias DDB1- and CUL4-associated factor homolog 1... 0.07 Archaeplastida
LOC_Os04g59460.1 No alias DDB1- and CUL4-associated factor homolog 1... 0.05 Archaeplastida
MA_10429393g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
Mp7g04090.1 No alias DDB1- and CUL4-associated factor homolog 1... 0.11 Archaeplastida
Solyc08g074370.4.1 No alias DDB1- and CUL4-associated factor homolog 1... 0.11 Archaeplastida
Zm00001e007504_P002 No alias DDB1- and CUL4-associated factor homolog 1... 0.03 Archaeplastida
Zm00001e042002_P001 No alias DDB1- and CUL4-associated factor homolog 1... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!